| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0739 |
|---|
| Symbol | |
|---|
| ID | 6287169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 775170 |
|---|
| End bp | 776168 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642624303 |
|---|
| Product | Triacylglycerol lipase |
|---|
| Protein accession | YP_001898322 |
|---|
| Protein GI | 187927835 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.946355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGA CTTCCCTGCT CCATGCTGTG TATGGATCAG CGCGCAGCTT CCTGCGCACG
CACGCTGCAG CCGCCGTCTT GGCCGCATCC GCCCTCAGCT TGGGTGCCGT CGCGCCGGCG
CAGGCCGCCA GCACCTATGC CGCGACGAAG TATCCGATCG TGTTGGTGCA TGGCCTGTCG
GGCACCAGCA AGTTTCTCGG CGTGGTCGAT TACTGGTACC AGATCCCCGA AGACCTGCGC
GCCAATGGGG CTAACGTCTA CGTGGCCGAT GTGTCCGCCT TCAACGATGA AACCGTGCGC
GGAGAACAGC TCGTCAGTCA GATCCGCAGC GTGCTTGCCG CCACGGGCGC CGCCAAGGTC
AACCTCATTG GTCACAGCCA GGGCGGCCTG ACCTCGCGCT ATGCGGCGGC AGTGGTGCCG
AACCTCGTGG CCTCCGTCAC CACCATTGGC ACGCCCCACA AAGGGTCGGA GTTTGCGGAC
TTTGTGGAAT CGACACCGGC CCCGTTCCAG GCGCTCGTGA ACCTCGGTGC CGACGTATTC
GGCTCGGTGC TCGGCTGGTT CAACGGCAAC AGCAATCCGC AGAACGGCTT TGCGGCGCTG
CATATCCTGT CGACGTCGGG CGCGGCCGAT TTCAACAAGG CATTCCCGAG TGCGGGCCTG
GCCAGCGGGT GCAACACCGG CAGCGCCACC GACGAGCGCA ACGGTAACGT GCAAAAGCTG
TATTCCTGGA CAGGCCGCTC CACCGCCACC AACCTCCTCG ACCTGTTTGA TCCGGTGCTG
GTCTTCAGCG GCGGCGTCAT GCAGGCGCGT GGCTCGGGGA CGAACGATGG GCTCGTCTCC
GTGTGCAGCG CGAAGTTCGG CCAGGTCTTG TCGACGGATT ACGCGTGGAA TCACCTGGAT
GAGGTCAACC AGCTGCTCGG TCTGATCGGT TGGAGCGCGG CCGACCCGGT TGCGGTGATC
CGCACGCAGG CCAATCGACT GAAGACTGCA GGCCTCTGA
|
|---|
| Protein sequence | MSQTSLLHAV YGSARSFLRT HAAAAVLAAS ALSLGAVAPA QAASTYAATK YPIVLVHGLS
GTSKFLGVVD YWYQIPEDLR ANGANVYVAD VSAFNDETVR GEQLVSQIRS VLAATGAAKV
NLIGHSQGGL TSRYAAAVVP NLVASVTTIG TPHKGSEFAD FVESTPAPFQ ALVNLGADVF
GSVLGWFNGN SNPQNGFAAL HILSTSGAAD FNKAFPSAGL ASGCNTGSAT DERNGNVQKL
YSWTGRSTAT NLLDLFDPVL VFSGGVMQAR GSGTNDGLVS VCSAKFGQVL STDYAWNHLD
EVNQLLGLIG WSAADPVAVI RTQANRLKTA GL
|
|---|
| |