Gene Rpic_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0728 
Symbol 
ID6286423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp763772 
End bp764566 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID642624291 
ProductAnkyrin 
Protein accessionYP_001898311 
Protein GI187927824 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.365587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.800826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATCG CTCCGCATCC CGCGCTCAAC CAGCTCATCG GCGTCATGCT GGGGATGGCG 
CTGGCGGTGG GCGACATGGC CAACGCGTGG CAGGAGCAGC ATCTGCCCAT CCTGCATGTG
GCGGCCAGCG CCGGCGCGAA AGTCGCACCC GGTGCGACCC ACGCCGCGGA CACCCGCCCC
GTGCGCCGCA GCGACCCGGC CACGCGTGAC CGTGACCTGA TTCTGGCGGC GCAGGCCGGC
AACACGATGG CCATCCAGTC GTTGCTGGCC GAAGGCGCCA GCTTGAAGGC GCGCGATGCT
GATGGCCGCA CGGCGCTCAT CGCCGCCGTC ATGGCGCACA TGGGCGCCGC GGCCCGCCTG
CTCATCCAGG CCGGGGCCGA CGTCAACCTG CAGGACAACA CGCAGAACAG CGCCTTTCTG
CTCGCTGCCA GCCAGGGCGA TGCGGAAACG GTGCGCCTGG CGCTGTCGCA CGGCGCCAAC
CTGCGCGCCA CCAACGCTGA TGGCGACACC GCGCTCATCC CGGCCGCGCG CCGCGGCTAC
GTCGAAGTCG TCAACGAACT CGTGAAGGCC GGCGTACCGC CCGATGCCAC CAACAACCTG
GGCCTGACCG CGCTGATCGA AGCCGTGGCC CTGGGCGATG GCAGCGACAA ATACGAGAAG
ACCGTGCAAC TCCTGCTCGA CGGCGGCGCC GACCCGAACC TGGCCGACCG CGGCGGCATC
ACGCCGATGC GGCATGCGCG TCAGCGTGGT TTCCACGGCA TCGGCGCGCT GCTCTTCAAG
GCGCGCGGAC ATTGA
 
Protein sequence
MLIAPHPALN QLIGVMLGMA LAVGDMANAW QEQHLPILHV AASAGAKVAP GATHAADTRP 
VRRSDPATRD RDLILAAQAG NTMAIQSLLA EGASLKARDA DGRTALIAAV MAHMGAAARL
LIQAGADVNL QDNTQNSAFL LAASQGDAET VRLALSHGAN LRATNADGDT ALIPAARRGY
VEVVNELVKA GVPPDATNNL GLTALIEAVA LGDGSDKYEK TVQLLLDGGA DPNLADRGGI
TPMRHARQRG FHGIGALLFK ARGH