Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0727 |
Symbol | |
ID | 6286422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 762026 |
End bp | 763732 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642624290 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001898310 |
Protein GI | 187927823 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0737822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.538259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGAC CGCACTTCCA GTTCTGGCCC CGACGTTTGC CGCACAACAT AAGCTCGCCG CAAACGAGCC TTTGGTACAA CCTGGAAGTG TCGGCGCGAC GCTATCCGGA CAAGGACGCG ATCATCTTTT ACGGTCGCCA CACCACGTTC CGTGAACTGC ACGACGATGC GGTCGCCGTG GCCGGCTGGC TGCAGCAGGT GGCGGGTGTG CAGAAGGGCG ACCGCGTGCT GCTGTATATG CAGAACTGTC CGCAGTTCAT GGCCGCGTAC TACGGCATCC TGCGTGCCGA CGCGGTGGTC GTGCCGGTCA ACCCGATGAA CCGGCCCGAA GAGTTCAAGC ACTACATCAC CGATGCGGGC GCTGCCACGG TCATCTGCAG CGCAGATCTG GCCGTCAACG TGACCACGGC CAACGCCGAG CTGCCGGAAG CGCAACGCAC CCGGCACCTG CTGGTCACGT CCTACGCCGA TGCGCTGCCG GCCCGGTACG AATATCCCGA AGACGCCCCG CCTGCGTGGA TCACCGCGCA GCATCCGGCG CAGCCCGGCG CGGTTGCATG GAACGACGCT CTCGCGCAGC GCCTCACGCC GGGCCCGCAC ACCGCCGGGC CGGACGACCT GGCCGTGATG CCGTACACGT CAGGCACCAC GGGCTTCCCC AAGGGCTGTA TGCACCCGCA CCGCACGGTG ATGCACAACA TCGTCGGTGG CTCGATGTGG TCGAATGGGA CGAAGGAAGG CGTGAGCCTG TCGATCATCC CGCTGTTCCA CGTGACCGGA ATGCAGTACG GCATGAACGC GCCGATCTAC ATGGGCTCCA CGGTCGTGAT GCTGCCGCGC TGGGATCGCG AGGTGGCGGG GCGGCTGATC TCGCGCTACA AGATCACGCA TTGGACGAAC ATCCCGACCA TGGTGATCGA CTTCCTGGCG AGCCCGCAGT TGGCGGAGTT CGACCTGTCG AGCCTCGCCT ACATCGGCGG CGGCGGTGCG GCGATGCCTC AGGCCGTGGC CGAGCGGCTG CTGAAGGATT TCAACCTCGC GTACCAGGAA GGCTACGGCC TGTCGGAAAC GATCGCGCCC ACGCACAGCA ATCCGGCCGA TCGGGCCAAG CAGCAGTGCC TGGGCATTCC GGTGTTCAAC ACCGACGCGC GCATCGTCGA TCCGCAGACG CTGCAGGAGT TGCCGATCGG TGAGGTCGGG GAAATCATCG TCAGCGGCCC GCAAGTCTTC CTCGGCTACT GGGGCAAGCC GCAGGCCAGC GCGGAAGTCT TCATCGAGTT CGAAGGCAAG CGCTTCTTCC GCACCGGCGA CCTTGGCCGG ATGGACGAAG ACGGCTACTT CTTCCTCACC GACCGGCTGA AACGCATGAT CAACGCGTCG GGCTTCAAGG TGTGGCCGGC CGAGGTGGAA AGCCTGCTGT ACAAGCATCC CGACGTACAG GAGGCCTGCA TCATCGGCAA GCGCGACGCG TATCGCGGCG AGTCGGTCAA GGCGGTGGTG GTACTCAAGG CCCACGCCAA GGGCAAGACC ACCGAAGACG ACATCATCAA CTGGGCGCGC GACAACATGG CGGCCTACAA GTACCCGCGC GTGGTCGAGT TTGTGGATGC GCTGCCCAAG TCCGGCACGG GCAAGGTGAT GTGGCGCACG CTGCAGGAGC AGGAAAACGC AAGGAATGAA GCGGCCGAGA AACCGGCCGC CGCGTAA
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Protein sequence | MTRPHFQFWP RRLPHNISSP QTSLWYNLEV SARRYPDKDA IIFYGRHTTF RELHDDAVAV AGWLQQVAGV QKGDRVLLYM QNCPQFMAAY YGILRADAVV VPVNPMNRPE EFKHYITDAG AATVICSADL AVNVTTANAE LPEAQRTRHL LVTSYADALP ARYEYPEDAP PAWITAQHPA QPGAVAWNDA LAQRLTPGPH TAGPDDLAVM PYTSGTTGFP KGCMHPHRTV MHNIVGGSMW SNGTKEGVSL SIIPLFHVTG MQYGMNAPIY MGSTVVMLPR WDREVAGRLI SRYKITHWTN IPTMVIDFLA SPQLAEFDLS SLAYIGGGGA AMPQAVAERL LKDFNLAYQE GYGLSETIAP THSNPADRAK QQCLGIPVFN TDARIVDPQT LQELPIGEVG EIIVSGPQVF LGYWGKPQAS AEVFIEFEGK RFFRTGDLGR MDEDGYFFLT DRLKRMINAS GFKVWPAEVE SLLYKHPDVQ EACIIGKRDA YRGESVKAVV VLKAHAKGKT TEDDIINWAR DNMAAYKYPR VVEFVDALPK SGTGKVMWRT LQEQENARNE AAEKPAAA
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