| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0716 |
|---|
| Symbol | |
|---|
| ID | 6287656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 750432 |
|---|
| End bp | 751652 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642624279 |
|---|
| Product | Cyclopropane-fatty-acyl-phospholipid synthase |
|---|
| Protein accession | YP_001898299 |
|---|
| Protein GI | 187927812 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.719598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.139789 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTCC AACAGGCGAT TGACCGCAAA CTTGAGCAGT GGATCCAGGA CATCCGCGAG
TCTGCCAACC TTCCCGTGCG CCTGCGGTTA TGGAACGGTG ATCAATACGA GCTGGGCCGC
TTCGAGCAGC CCCGCGTCAC GCTCACCGTG CGCGAAGCGA GCGCTCTGCC ACTGCTGCTC
TCCCCAACGC TGAACAACCT GGGCGAAGCG TACGTCCAGG AAAAGATCGA CCTGGACGGC
AAGCTGGCCG ACATCATCAA CGTGAGCTAC AGCCTGGCTG CTGCGGCCGC GGTCAGCAGC
GGCAATGCGC TGGCCCGCGT GGTGCGCCAC TTCGCCCACA CGAAGGAAGG CGACAAGGAA
TCGATCCAGT ACCACTACGA CGTTTCCAAC GATTTCTACA AGCTGTGGCT GGATCAGAAC
ATGGTCTACT CCTGCGCCTA CTTCGAAAAT GGCGATGAAA CCCTCGACGA AGCGCAGATC
AAGAAGATCG ACCACATCCT CACCAAGATC CGCTTACAGC CCGGGCAAAC GCTGCTCGAT
ATCGGCTGCG GCTGGGGCGC GCTGGTGCTG CGTGCCGCGC AGAAGTACGG CGCGCGCTGC
CTGGGCGTGA CGCTGTCGCA AAACCAGTAC GACCTCGCCA CCGAACGCGT GCGGGCGGCC
GGCTTGCAAG ACCAGATCGA AATCCGCATC CAGGACTACC GCGACCTGAC CGGCCAGTTT
GATCGCATCA CGAGCGTCGG CATGTTCGAG CACGTCGGTC GCAAGAATCT GCCCGGATAT
TTCCGCCGCA TGCACGATCT CCTGGCTGAT GGCGGCGTCG CCATGAACCA CGGCATCACG
TCTTCCGATA CGGCCGGCGG CGAAAGCTCC ATGGGCGGCG GCGATTTCAT CGATCGCTAT
GTCTTTCCGC AGGGCGAACT GCCGCACATC TCGCTGGCGC TGAGCGCCGC GCAGGATGGC
GGCCTGGAAG CGCTTGACGT TGAAAGCCTG CGCCGCCACT ATGCGCGCAC GCTCGAGCAC
TGGGCCGAGC GCTTCGAGGC CAACGGCGAA ACCATCCGCG CAATGGTGGG CGAGAAGAAA
TACCGCATCT GGCGCGTCTA CCTGGCCGGC TGCGCACACG CCTTCGACGC CGACGAAATC
TCGATCTTCC AGACCGTGCT GCAGAAGGCC GGCAAGTCGG CGACGACGAT CCCGTGGTCG
CGCCGCTATA TCTACGCGTA A
|
|---|
| Protein sequence | MFFQQAIDRK LEQWIQDIRE SANLPVRLRL WNGDQYELGR FEQPRVTLTV REASALPLLL
SPTLNNLGEA YVQEKIDLDG KLADIINVSY SLAAAAAVSS GNALARVVRH FAHTKEGDKE
SIQYHYDVSN DFYKLWLDQN MVYSCAYFEN GDETLDEAQI KKIDHILTKI RLQPGQTLLD
IGCGWGALVL RAAQKYGARC LGVTLSQNQY DLATERVRAA GLQDQIEIRI QDYRDLTGQF
DRITSVGMFE HVGRKNLPGY FRRMHDLLAD GGVAMNHGIT SSDTAGGESS MGGGDFIDRY
VFPQGELPHI SLALSAAQDG GLEALDVESL RRHYARTLEH WAERFEANGE TIRAMVGEKK
YRIWRVYLAG CAHAFDADEI SIFQTVLQKA GKSATTIPWS RRYIYA
|
|---|
| |