Gene Rpic_0705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0705 
Symbol 
ID6288347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp740291 
End bp741673 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content65% 
IMG OID642624268 
ProductXanthine/uracil/vitamin C permease 
Protein accessionYP_001898288 
Protein GI187927801 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.120136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC AGTCCATTCC GTCGTCGACG GAACTTGGCG CCGCTGGCAT CGCCGATGCG 
CGTGCCATTG ATCGCTATTT CCAGATTTCT GCACGCGGCA GCACGCAAAA GCGCGAGGTC
GTGGCTGGCA TCACCACCTT CATGGCGATG GTCTACGCCG TGTTTGTCGT GCCCGGCATG
CTGGGCAAGG CCGGCTTTGA TACCAGCGCT GTGTTCGTCG CGGTGTGTCT GACCACCGCC
TTCGGCTCGC TGCTCATGGG CTTGTGGGCC AAGCTGCCGA TCGCCATCGG CTGCGCGATT
TCGCTGACCG CGTTCATGGC CTTTGGCCTG GTGCTCGGGC AAAAGCTCAC GCCAGAGATC
GCACTCGGCG CCGTGTTCCT GATGGGTGTG GTCTTCACCG CCATCTCGGC CACGGGCGTG
CGGTCCTGGA TCCTGCGCAA TCTGCCTTCG GGCGTGGCGC ACGGCACGGG CATCGGCATC
GGGCTGTTCC TGCTGCTCAT CGCGTCCAAC GACGTGGGGC TGGTCGTCAA GAACGCCGGT
GCGGGCCTGC CCGTTGCACT GGGCCACGTC ACTGCCTTCC CGGTGATGAT GTCGGTGCTG
GGACTGGCCG CCATCTTCGG CATGGAGCGT CGTCGCGTGC CGGGCGGCAT CCTGATCGTG
ATCATTGCCA TCTCGGTCCT GGGACTGATC TTTGACCCGG CCGTGAAGTT CACCGGCGTG
TTCGCCGTGC CCTCGCTCGC CGCTGCAGGG CATGCCTCGC TGATCGGCAC AATGGATATT
CGCGGCGCAC TTACGGCCGC CGTGCTGCCC AGCGTGCTGG CACTGGTGAT GACCGCCGTG
TTCGATGCCA CCGGCACGAT CCGCGCGGTT GCCGGCCAGG CCGGACTGCT CAACGACAAG
GGCCATATCA TCAACGGTGG CCGCGCCCTC ACGGCCGATT CGATCAGCTC GATCTTCTCG
GCGTTCTTTG GCGGGGCTCC GGCGGCGGCT TACATCGAGT CGACGGTCGG CGTAGCAGCG
GGCGGCAAGA CTGGCCTGAC GGCTGTGGTG GTCGGCGTGA TGTTCCTGGC GGTGATGTTC
TTCTCGCCGC TGGCGGGCCT GGTGCCGTCA TACGCAACGG CCCCGGCGCT GATGTATGTC
GGCCTGCTGA TGCTCTCCAG CGTGAGCAAG CTGCACATGG ACGACATGGT TGACGCACTG
TCGGGCCTAG TCTGCGCCGT GTTCATCGTG CTGACCTGCA ACATCGTCAC CGGCATCATG
CTGGGCTTTA GCACGCTGGT GATCGGCCGC GTGGTGGCCG GCGAATGGCG CAAGCTGAAC
ATCGGCACCG TGGCGATCGC GGCTGCGCTG GTAGCGTTCT ACGTAGGCGG CTGGGCGATC
TGA
 
Protein sequence
MAEQSIPSST ELGAAGIADA RAIDRYFQIS ARGSTQKREV VAGITTFMAM VYAVFVVPGM 
LGKAGFDTSA VFVAVCLTTA FGSLLMGLWA KLPIAIGCAI SLTAFMAFGL VLGQKLTPEI
ALGAVFLMGV VFTAISATGV RSWILRNLPS GVAHGTGIGI GLFLLLIASN DVGLVVKNAG
AGLPVALGHV TAFPVMMSVL GLAAIFGMER RRVPGGILIV IIAISVLGLI FDPAVKFTGV
FAVPSLAAAG HASLIGTMDI RGALTAAVLP SVLALVMTAV FDATGTIRAV AGQAGLLNDK
GHIINGGRAL TADSISSIFS AFFGGAPAAA YIESTVGVAA GGKTGLTAVV VGVMFLAVMF
FSPLAGLVPS YATAPALMYV GLLMLSSVSK LHMDDMVDAL SGLVCAVFIV LTCNIVTGIM
LGFSTLVIGR VVAGEWRKLN IGTVAIAAAL VAFYVGGWAI