| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0704 |
|---|
| Symbol | |
|---|
| ID | 6286475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 739505 |
|---|
| End bp | 740143 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642624267 |
|---|
| Product | Peroxidase |
|---|
| Protein accession | YP_001898287 |
|---|
| Protein GI | 187927800 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0450] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0999966 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTAC GTTTGGGCGA TATCGCCCCT GATTTCGAGC AGGATTCCAG TGAAGGCCGC
ATCAAGTTTC ATGAGTGGCT GGGCAATAGC TGGGGCGTGC TTTTTTCGCA CCCGGCCGAT
TACACGCCGG TCTGCACCAC CGAACTGGGC CTGACCGCCA AGCTGAAGGA CGAATTTGCC
AAGCGCAATG TCAAGGCGAT TGCGCTGTCG GTCGACTCGG TTGAGTCGCA CAAGGGCTGG
ATCAACGATA TCAACGAGAC GCAGAACACC AGCGTCAACT TCCCGATCAT TGCCGACCCC
GATCGCAAGG TCTCGCAGCT GTACGACATG ATTCATCCGA ATGCGAGCGA GACGTTCACC
GTGCGTTCGT TGTTCGTGAT CGATCCGAAC AAGAAGATTC GCCTGACGAT TACGTATCCG
GCATCGACGG GGCGTAATTT CAATGAAGTC CTGCGCGTGA TCGACTCGCT GCAGTTGACC
GAGTACCACA GCGTGGCCAC GCCGGGTAAC TGGCAGGACG GCGATGACGT GGTCATCGTG
CCCTCGCTGA AGGATGAGGA AGTCATCAAG CAGAAATTTC CGAAGGGCTA CAAGGCGTTG
CGTCCGTATC TGCGCCTGAC GCCGCAGCCC AATAAGTAA
|
|---|
| Protein sequence | MSLRLGDIAP DFEQDSSEGR IKFHEWLGNS WGVLFSHPAD YTPVCTTELG LTAKLKDEFA
KRNVKAIALS VDSVESHKGW INDINETQNT SVNFPIIADP DRKVSQLYDM IHPNASETFT
VRSLFVIDPN KKIRLTITYP ASTGRNFNEV LRVIDSLQLT EYHSVATPGN WQDGDDVVIV
PSLKDEEVIK QKFPKGYKAL RPYLRLTPQP NK
|
|---|
| |