| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0692 |
|---|
| Symbol | |
|---|
| ID | 6289004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 730295 |
|---|
| End bp | 731269 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642624255 |
|---|
| Product | Gluconate 2-dehydrogenase |
|---|
| Protein accession | YP_001898275 |
|---|
| Protein GI | 187927788 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.108341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.227497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGC TTGTCGTTGC CTACAAGCCT TTGCCCGACG ATGTCACGGC TCAGTTGCGC
GAGCATGTCG AACTCGTGCA GGTTGACGGT GCCGAGGCGT TGACCGAGGC GCTTACAAAG
GCCGAGGGTG CGATCGGTGC GAGCCTGAAG ATCACCTCCC AGATGCTCGA CCGCGCGCCC
CGGCTCAAGG CGTGGTCCAC GATCTCGGTC GGCTACGACA ATTTCGACGT GCCCGATCTG
ACGCGTCGTG GCATTACGCT GGCGCACACA CCTGATGTGT TGACGGAATC AACTGCCGAT
ACCGTGTTTT CGCTGATCCT CTCGTCTGCG CGGCGCGTTG TGGAACTGGC CGAGTGGGTC
AGGGCCGGCA ACTGGCAGCG CAGCATCGGA CCCGAGCTTT ACGGCACGGA TGTTCAGGGC
AAGACGATTG GCATCGTCGG CCTGGGGCGG ATCGGTGCGG CATTGGCTCG CCGTGCAGCA
CTGGGTTTCC GGATGCGCGT CGTGTACACG AATCGGCATC CGCATCCCGA GGCCGAAGCG
CAGTACGGCG CGCGCCGCGT GACGCTCGAC ACGTTGCTGG CCGAAGCGGA TTTTGTTTGC
CTGCAGGTGC CGCTGACGCC GGAAACGCAG CACCTGATCG GCGCGGCAGA ACTGGCGAAG
ATGAAGCGCA GTGCGACTCT CATCAATGCA TCGCGTGGGG CCGTCGTCGA CGAAGCAGCG
CTCATCGATG CGTTGCGTAA CGGGACGATA CGCGGCGCGG GGCTCGATGT GTTCGAGCAC
GAACCGCTGC CGGCCAACTC GCCACTGCTG GCGATGAACA ACGTGGTTGC ACTACCCCAT
ATCGGCTCCG CGACGCACGA GACGCGACAC GCAATGGCCC GCTGCGCCGC TGACAACCTG
ATCAAGGCGC TGGTCGGTAC GTTGCGTGAG AACCTAGTCA ATCCACAGGT GCTGGAGCCC
ACCCGCGCCT CATGA
|
|---|
| Protein sequence | MKPLVVAYKP LPDDVTAQLR EHVELVQVDG AEALTEALTK AEGAIGASLK ITSQMLDRAP
RLKAWSTISV GYDNFDVPDL TRRGITLAHT PDVLTESTAD TVFSLILSSA RRVVELAEWV
RAGNWQRSIG PELYGTDVQG KTIGIVGLGR IGAALARRAA LGFRMRVVYT NRHPHPEAEA
QYGARRVTLD TLLAEADFVC LQVPLTPETQ HLIGAAELAK MKRSATLINA SRGAVVDEAA
LIDALRNGTI RGAGLDVFEH EPLPANSPLL AMNNVVALPH IGSATHETRH AMARCAADNL
IKALVGTLRE NLVNPQVLEP TRAS
|
|---|
| |