Gene Rpic_0689 details

Gene Information

• Locus tag: Rpic_0689
• ID: 6286564
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12J
• Kingdom: Bacteria
• Replicon accession: NC_010682
• Strand: +
• Start bp: 727161
• End bp: 727931
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642624252
• Product: Xylose isomerase domain protein TIM barrel
• Protein accession: YP_001898272
• Protein GI: 187927785

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.208396
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 0.278119
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAGATA TCGTGATCGT GGCGAGCGCG TTCGGCGCCG CTCAGGTGCG CGCGCAGGGG 
CATCACGCCT ATGTTCCCCT GGCCGCGTCG GTCGGCGCAG CCGGCTTCGA GGTGCGGCGT 
GAATTGTTGC CCGCTGGGCT GGATGGCACG GTATCGGCTG ACTTACTGAC TGCATTGGGC 
CGCCTGATGG CAGCGCATGG TCTGTGGGCG GTCTATTCCA CGCCGGCCGC GCTGTACACG 
GACGTCGGCG CTCTGGACAC GGTCGCTGTC CGAGGTGCGC TGGTTGAAGC GCAAACCTTG 
GGTGCGCGCA TCGTGAAGTT CCAGCTTGGC GGCTTTGCCG GCGATGCGTC GGCGGAGTTG 
CTGGCCCGAC TCCTGCGAGG CTGGCGCGCA CGGGTGCTGG TCGAGAACGG TCAACAGGCG 
GTGGGCGGCT CCCTGGCGCA GTTCCGCAGT TTGTTCGACG CCTTGGAAAG GGCGGATGCG 
GCGGACATGC TGGGCATGAC GTTCGACGTT GGTAACTGGG AATGGTCGGG CGAAGCGCCG 
CTGGCGTGCG CGCGGGCCCT GGCCCCGTAC GTCGAATACA TCCATTGCAA GAGCGTCGGG 
GGCGAGGGGG CACGCCGCTT TGCGGTGGCG CCGGCTGGAA ACGATACGCG GTTCTTGGCT 
GTGCTGGCGG CATTGCCGGG CGATGTCCCG CGCGGCATCG AATTTCCGTT CGACGCGGTC 
GATCCTGTCG CCGATGCCCA TCAACACGTC ATGTGGCTCA AGGCCGCCTG A 

 

Protein sequence

MADIVIVASA FGAAQVRAQG HHAYVPLAAS VGAAGFEVRR ELLPAGLDGT VSADLLTALG 
RLMAAHGLWA VYSTPAALYT DVGALDTVAV RGALVEAQTL GARIVKFQLG GFAGDASAEL 
LARLLRGWRA RVLVENGQQA VGGSLAQFRS LFDALERADA ADMLGMTFDV GNWEWSGEAP 
LACARALAPY VEYIHCKSVG GEGARRFAVA PAGNDTRFLA VLAALPGDVP RGIEFPFDAV 
DPVADAHQHV MWLKAA