Gene Rpic_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0688 
Symbol 
ID6286562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp725645 
End bp726760 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content65% 
IMG OID642624250 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_001898271 
Protein GI187927784 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.277778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.312102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATA TCGATCTCAA CGTGTTGTCC CACACAGTGC TGTGGGGCAC GTTTGCGCTG 
ACGTTCGTGT TTGGCGCGAT CCTTCAGCGC ACGCACTTCT GCACCATGGG CGCGGTGTCC
GATGTCGTCA ACATCGGCGA CTGGAACCGG CTGCGCATGT GGGCGCTGGC CATCGGCGTG
GCCATGATCG GCACGGGATG CCTGAGCTGG CTTGGCCTGA TCGATACGAG CAAGACGATC
TACACGGCGA GCAAGCTGCT GTGGCTGTCG TCGCTGGTGG GCGGGCTGTT GTTCGGCTTC
GGCATGGTGC TGGGCTCGGG GTGCGGCAGC AAGACGCTGG TGCGCATCGG CGGCGGCAAT
CTCAAGTCGG TCGTGGTGTT CGTGTTCCTG GGGCTGGCGG CGTACATGAC GCTCAAGGGC
GTGTTTGGGG TGGTGCGTGT GGCGACGGTG GACAGCGTAG CCGTTGCGTT GCCGACGTCG
CAGGATCTGC CGAGCGTGCT GGGCCACGCG TTCTCCACCG ATGCGCGCGT GCTGCGTCTC
GTGCTGGCGC TGGGGATCGG CGGGGCGCTG TCGCTGTGGG CGCTGCTGGG GCGCGATTTC
CGCACGGGCG ACAACCTGCT GGGCGGCATC GGCGTCGGGC TCATCATCGT CGGCATGTGG
TACGTATCGG GGCATCTCGG TTACGTGCAG GAAGATCCGA ACACGCTGCA GGAAGCGTTT
GTGGCGACCA ACAGCGGGCG CATGGAGGCG CTGAGCTTCG TGGCCCCGGT GTCGTATACG
CTGGAGTGGC TGATGTTCTT CAGTGATACA TCGAAGGTAC TGACGGTCGG CATTGTGAGC
GTGCTTGGCG TGATTGCAGG CTCGGCAGCG GTGGCGCTGG CCACGCGCAC GTTCCGCTGG
GAGGGCTTTG CCAATGCCGA GGACACGGGC AACCACATCA TTGGCGGCAT CCTGATGGGC
ATTGGGGGCG TCACGGCGCT CGGTTGCACG ATCGGGCAGG GGCTGTCGGG CGTGTCGACG
CTGGCGATCG GTTCGTTCAT CGCGCTGGCC GGCATCGTGA TCGGTGCGGT GCTGGCGTTC
CGCTACCAGA TGTGGCGAAT GGAGCAGCTC GTTTGA
 
Protein sequence
MPDIDLNVLS HTVLWGTFAL TFVFGAILQR THFCTMGAVS DVVNIGDWNR LRMWALAIGV 
AMIGTGCLSW LGLIDTSKTI YTASKLLWLS SLVGGLLFGF GMVLGSGCGS KTLVRIGGGN
LKSVVVFVFL GLAAYMTLKG VFGVVRVATV DSVAVALPTS QDLPSVLGHA FSTDARVLRL
VLALGIGGAL SLWALLGRDF RTGDNLLGGI GVGLIIVGMW YVSGHLGYVQ EDPNTLQEAF
VATNSGRMEA LSFVAPVSYT LEWLMFFSDT SKVLTVGIVS VLGVIAGSAA VALATRTFRW
EGFANAEDTG NHIIGGILMG IGGVTALGCT IGQGLSGVST LAIGSFIALA GIVIGAVLAF
RYQMWRMEQL V