| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0684 |
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| Symbol | tolB |
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| ID | 6289390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 722091 |
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| End bp | 723395 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624246 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001898267 |
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| Protein GI | 187927780 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.672983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.603997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGA TGCGAACGAT GTGGATCCCG ATGTTCCGAC GCGCTGCGCA GGCACTGCTG
CTGACCGCAG CGTGCGCCGG CGTGGCCCAT GCCCAGCTCA ATGTGGAGAT CTCGGGCGTC
GGCGCCAGCC AGTACCCGAT CGCGATCGCC AACTTCCAGG GCGAGGCGCA GGCCCCGCAA
AACCTCTCGG CCATCGTCCG GGCAGACCTG GTGCGCAGCG GCCGCTTCTC GAACGTCGAT
GTTGCGGGCG CCGTGGTACC GGAGAGCCCC GCACCTGACC TGGGTGCCTG GAAAGCCAAG
GGCGCCGCAG CATTCGTGGG CGGCACCGTG ACCCGTAACG GCGACCGCTA CGAAATCCGC
TTCCGCCTGT ACGACACCGC CAAGGGCGAA AGCCTGGGCG GTCTGTCGCT TACGCGCGGC
CCCGGCCAAC TGCGCCTGGC CGCACACGAA ATTGCCGATT ACATCTACCA GAAGCTGATT
GGCGAGCGCG GTGTTTTTGC AACGCGCCTG TCGTACGTGT CCAAGGTCGG CCGCCGCTTC
CAGCTGCAGA TTTCCGACTC GGACGGCGCC AACCCGCAGA TCGCATTGAC GAGCAACGAG
CCGATCATCT CGCCGGCGTG GTCGCCGGAT GGCACCAAGG TCGCGTATGT GTCGTTCGAG
AGCAAGAAGC CGGTGGTGTA TGTGCACGAC CTGGTGGCAG GCCGCCGCAC GGTCATCTCG
AACCAGAAGG GCAACAACTC TGCGCCGGCC TGGTCGCCGG ACGGCCGTCA TGTGGCGGTG
TCGCTCTCGC GCGATGGCAA TACGCAGGTC TACCTGGTCA ACGCCGATGG CTCGGGCCTG
CGCCGCCTGA GCCGCAGCAG CGCGATCGAT ACCGAGCCGT CGTTCTCGCC GGATGGCCGC
TCCATCTACT TCACCAGCGA CCGCGGTGGC GCACCGCAGA TCTATCGCAT GTCGGTTGAC
GGCGAAGAGG CGGGCGGTGC GCAACGCGTG ACGTTCAAGG GCAACTACAA CACGAGCCCG
CGCGTGTCGC CAGACGGCAA GCTGCTGGCG TACATTTCGC GCGTGGGCGG TGCCTTCCGC
CTGTACACGC AGGATTTGTC GAATGGCGAT GTGAACGCGT TGACGGACAC CTCTAACGAT
GAATCGCCGA GCTTTGCGGC CAACGGCAAG TTCATCCTGT ATGCCACGCG CGTTGGCGGC
AAATCGGTGT TGGCCGCTGT GTCCACCGAC GGCCGTACGC GTCAGGTTCT TTCCCTCCAG
GCCGGCGAAG TTCGTGAGCC GGCGTGGGGT CCTTTCATGC AATAA
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| Protein sequence | MNMMRTMWIP MFRRAAQALL LTAACAGVAH AQLNVEISGV GASQYPIAIA NFQGEAQAPQ
NLSAIVRADL VRSGRFSNVD VAGAVVPESP APDLGAWKAK GAAAFVGGTV TRNGDRYEIR
FRLYDTAKGE SLGGLSLTRG PGQLRLAAHE IADYIYQKLI GERGVFATRL SYVSKVGRRF
QLQISDSDGA NPQIALTSNE PIISPAWSPD GTKVAYVSFE SKKPVVYVHD LVAGRRTVIS
NQKGNNSAPA WSPDGRHVAV SLSRDGNTQV YLVNADGSGL RRLSRSSAID TEPSFSPDGR
SIYFTSDRGG APQIYRMSVD GEEAGGAQRV TFKGNYNTSP RVSPDGKLLA YISRVGGAFR
LYTQDLSNGD VNALTDTSND ESPSFAANGK FILYATRVGG KSVLAAVSTD GRTRQVLSLQ
AGEVREPAWG PFMQ
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