| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0681 |
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| Symbol | |
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| ID | 6287643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 719819 |
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| End bp | 720511 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624243 |
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| Product | protein TolQ |
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| Protein accession | YP_001898264 |
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| Protein GI | 187927777 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.458824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.677661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCCCG TCGAGGTCAC ACAAGATCTG TCGATCGTCT CGCTGGTGCT GCACGCCAGC
CTCCTGGTCC AATTCGTCAT GGGCCTGCTG CTGGTGATGT CGCTGTTCTC CTGGACGTAC
ATCTTCCGCA AAGCCTTCGC CCTGCGCGCC GCGCGCAGCC AGACCGAATC GTTCGAGCGC
GATTTCTGGG CTGGCGGCGA CCTCCAGGCG CTGTATCAGA GCGCCGCCAA CAACCGCCAC
ACCACCGGCG CGCTTGAGCG CATCTTTGAA GCCGGCATGC GTGAATATTT GAAAGCGCGT
GAGCTGCAGC GCGGCGGCGG CGATCCGAGT GCCATCCTCG ATGCTTCCCG CCGTGCCATG
CGTGCGGCTT ACCAGCGTGA GATGGACTCG CTCGAATCGC ACCTGCCATT CCTGGCGTCG
GTCGGCTCGG TCAGTCCGTA TATCGGCCTG TTCGGCACGG TCTGGGGGAT CATGAACGCC
TTCCGCGGCC TGTCCAACGT GCAGCAGGCG ACGCTGTCGG CGGTGGCGCC CGGTATTGCC
GAAGCGCTGG TCGCCACGGC CATCGGTCTG TTTGCGGCCA TTCCGGCGGT GATCGCCTAT
AACCGCTACG CCACCGAAAT GGACCGCCTG GCCAACCGGT TCGAGAGCTT CATGGAAGAG
TTCTCGAACA TCCTCCAGCG CCAGACGCGC TAA
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| Protein sequence | MNPVEVTQDL SIVSLVLHAS LLVQFVMGLL LVMSLFSWTY IFRKAFALRA ARSQTESFER
DFWAGGDLQA LYQSAANNRH TTGALERIFE AGMREYLKAR ELQRGGGDPS AILDASRRAM
RAAYQREMDS LESHLPFLAS VGSVSPYIGL FGTVWGIMNA FRGLSNVQQA TLSAVAPGIA
EALVATAIGL FAAIPAVIAY NRYATEMDRL ANRFESFMEE FSNILQRQTR
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