Gene Rpic_0680 details

Gene Information

• Locus tag: Rpic_0680
• ID: 6287642
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12J
• Kingdom: Bacteria
• Replicon accession: NC_010682
• Strand: +
• Start bp: 719418
• End bp: 719822
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642624242
• Product: tol-pal system-associated acyl-CoA thioesterase
• Protein accession: YP_001898263
• Protein GI: 187927776
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.10976
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 0.819099
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTTCTT TTGACTGGAA CCTGCGCGTG TATTGGGAAG ATACCGACGC AGGCGGCGTG 
GTGTTTTACG CCAACTATTT GAAATTTTTT GAGCGCGCCC GCACCGAGTG GCTGCGCGCG 
CTTGGGGTCG ACCAGCAGGC TCTGGCCGAC ACGACCGGGG CCATTTTCGT GGTCCGCAGC 
ACCGCCGTGG ATTACCGCGC GCCGGCGCGC CTGGATGACC TGCTGCAGAT CCGTTCGCGT 
ATGGAACGGG TTGGCCCTGC GTCTGTCCAA TTCGCCCAAG AAGGCTGGCG TGGCGACGTT 
TTGCTCGCAT CAGGCACGAT TCGTGTTGGA TGTGTCGACC GGCTCACTTT CCGGCCGACC 
CCGATTCCCG CTCCCGTACT CGCAACCATC AAAGCCGCCG CATGA 

 

Protein sequence

MASFDWNLRV YWEDTDAGGV VFYANYLKFF ERARTEWLRA LGVDQQALAD TTGAIFVVRS 
TAVDYRAPAR LDDLLQIRSR MERVGPASVQ FAQEGWRGDV LLASGTIRVG CVDRLTFRPT 
PIPAPVLATI KAAA