| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0672 |
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| Symbol | |
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| ID | 6287377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 710526 |
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| End bp | 711560 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642624234 |
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| Product | type IV pilus assembly protein PilW |
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| Protein accession | YP_001898255 |
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| Protein GI | 187927768 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.573138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATC GCCGACAAAC CGGCCTCTCA CTAGTTGAAC TCATGGTCGG ATTGACCCTG
GGTTTGCTGC TCGTGGGCAT TGCCGTTTCG ATCTATCTCT CGGGTCGTCA AACATCGCGC
GTGGTCGATA CGGTGGGGCG CTTGGAGGAA AGCGCCCGCT TTGCGGTTGA GGCGATCGAG
CAGGACATCC GCATGACCGG TTTTCGCGGT TGTAACGGCA TGGCCAACTC GCCGGTCAAT
ACCCTGAACT CGCCGGGCTC CTTTAACAAT CGATTTGATC AGACGCTTTT TGGTTACCAC
GGCAGTGGAT CAACGTGGAC GCCGGCGCTC GATACGAGCA TCAGCAGCCT TCCGCAACCT
CCGATTGCGG GGACAGATGT CATTGCCATC AAGCGCACCT ACGACAATGG CGCTGCATTA
ACTGCGCAGA TGACGGGAAC AACTGGTGCG GTGACGGTGG AGGCAAGCGC GCCGTTTGCT
CAGGGTGACT ACATCCTCGT CTCCGACTGT GAAGCTCAAG CGGTCTTTCA GGCGACGCAG
GTCACGAGCA GTCCAACGAC TGGTTCGCTG TCGCATGCAG CCGTTGCTGT GCCAACGCCT
GGCAATGCCA GTGCGGATCT CACGCATGTC TTCAACACGG ATGCATCGGC GTACCGTGTT
GTGACCAAAA CCTATTTCGT TGCCCAGAGT GCCAGGAACA AAGCGGTGAA CTCCTTGTGG
TCTTACAGCG TGCCTGACTA CACGGGTGCG GGTCAGCCCC AGGAACTGGT TGAGGGTGTT
GATAACCTGG TTCTTCTCTA TGGGGAAGAC ACGGATAACG ACCAAGCCGC GAACCGCTAT
GTCACTGCAG ATAACGTTGG TACCTGGAAC AACGTAGTCA GTGTGCGGAT TCAGCTCTTG
ATGGCATCGG TTCAGAACAG CGTGTCGCCC ATTGCTCAAA CCTATACCTT CAATGGCGCT
TCGGCGACGG CAGCCGACAG AAGAATACGC TCGGTGTTTA CGAGCGTAAT TACGCTGCGC
AACCGGGTGA TGTGA
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| Protein sequence | MMNRRQTGLS LVELMVGLTL GLLLVGIAVS IYLSGRQTSR VVDTVGRLEE SARFAVEAIE
QDIRMTGFRG CNGMANSPVN TLNSPGSFNN RFDQTLFGYH GSGSTWTPAL DTSISSLPQP
PIAGTDVIAI KRTYDNGAAL TAQMTGTTGA VTVEASAPFA QGDYILVSDC EAQAVFQATQ
VTSSPTTGSL SHAAVAVPTP GNASADLTHV FNTDASAYRV VTKTYFVAQS ARNKAVNSLW
SYSVPDYTGA GQPQELVEGV DNLVLLYGED TDNDQAANRY VTADNVGTWN NVVSVRIQLL
MASVQNSVSP IAQTYTFNGA SATAADRRIR SVFTSVITLR NRVM
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