| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0665 |
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| Symbol | |
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| ID | 6288741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 706053 |
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| End bp | 706625 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624227 |
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| Product | putative type 4 fimbrial pilin related transmembrane protein |
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| Protein accession | YP_001898248 |
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| Protein GI | 187927761 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.956301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.276525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGT CTCGTCTGCG GGCCGGGTTC ACGCTGGCTG AGCTCGTCGT CGTCCTGAGC
GTGATATCGA TCCTTGCGAT GTTCGCCGCG CCCGCCGCGT TGAATTGGTG GCAACGCGAG
ACTGTCGTCG TTCTGGCCGA CCGCTTTGTC AGCGCGATCT CGCTGGCGCA GACCATGTCG
CGCAATCAGC GTGCGTGGGT TCACCTCGGC CCGTGCAACG CTGAGCAGGG TTGGTCGTCG
GGATGGGCGT TGTATATGAT GCCCTCGCCG CAAACCCAGG CGACGCCGCT TGAACCCGGC
ACCGAAGATA TCTTGATGCG CGTGTCGCCG CCTGTGGTGC CGCCCGTCGA ATTTGCGTTC
ACGGCGTCAC AGCGGGATGT CGACACCCTC TCTTTTGCAC CTGTGGGATA CTCGCGACAG
CGTAACGGCA GCCAGCTCTA CGGCACGCTG ACAATCCGAT CTGGAGCACA TGAGCGGCGG
GTCCGCATCA GCTCCGCAGG CCGCGCCCGC ATCTGCGATC CGGCCAAGGA CACCAAAACG
TGCGGCGCCA GCGCCTCGGC TAACGACGAT TAA
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| Protein sequence | MNASRLRAGF TLAELVVVLS VISILAMFAA PAALNWWQRE TVVVLADRFV SAISLAQTMS
RNQRAWVHLG PCNAEQGWSS GWALYMMPSP QTQATPLEPG TEDILMRVSP PVVPPVEFAF
TASQRDVDTL SFAPVGYSRQ RNGSQLYGTL TIRSGAHERR VRISSAGRAR ICDPAKDTKT
CGASASANDD
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