| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0658 |
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| Symbol | |
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| ID | 6286772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 699416 |
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| End bp | 700603 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624220 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001898241 |
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| Protein GI | 187927754 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.118125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGTT GGAAAACCCT TCATTCTTCC GGGATCGGAT CGGCGCTGCA ACGCCGGCTC
GTAGCCCCGG TTGGCCGCCG CCTCGCGCGT GCTGGTCAAG TTGCGCTGCC TCGTAAGCTG
CGCATGGAGT TGAACGCAGG GGGCGCCGCC GCGTCCCGCA ATGAGTTGCA TCCTGGCGTA
CTGCTGGTGT TCCGCAGCGG GCATGTCGTG CTTAATAGCA TCGGCTTGCT GGCGGTGGCC
GCCGCAGTTG CGCTCTCGCT CAACAGCGAG TGGCGCGCCA CGGTCGCTCA ACGCGTGCTG
CATTTCACGC CGGGTGTCGA CACCAGTGTC GCCTCGGCCA ATCCGTCGCC CGCGATTGCG
GCTGGCGTGC AGCCGGTTGC TTTCGCACCG ACGGCGCCGT CCGCCGGTAC GGGTGCCGCT
CAAGCTGTAG CGCCTGCTGC GGCGCAGGGT GGCACGGTCG CGGCCGCAGG TTGGGACACG
CTTTCGAAGG TGCCGTCCGT GGCCGAGTTG GCTGCGCAGA TTCCGAACAC GCAAGTCGTC
CGTGACGCGC GTGAGTCGGC AACCGCCGGT ACCCCGCGAG AGCAGGCTGC CGTGGCCGAA
TACATCGCCC GCAAGTACCG CGTGGCGGCC ACTGCCACTG GCCAGTTGGT GAAGGCGGCC
TATCAGACCG GCAAGGAAGT CGGCCTGGAT CCGCTGCTCA TCCTGGGCGT GATGGCCATC
GAGTCCAGTT TCAACCCGTT CGCCGAAAGC GGTATGGGTG CGCAGGGTCT GATGCAGGTC
ATGACCAAGG TCCACCAGGA CAAGTACGAA GTGATGGGCG GCGTTGGTGC TGCGCTCAAT
CCGTATGCCA ACATCAAGGT CGGTGCGCTG GTGCTGAAGG ATTGCATCGC GCGTGCAGGT
TCGATCGAAG GCGGCCTGAA GCTGTATGTC GGGGCGGTCA CGCAAGGCGA CGGCGGCTAC
GGCGGCAAGG TGCTGCAAGA GCGGTCGCGC CTGCGCATGG TGGCCACTGG GCATCGTTCG
CCCATGACGG TGGCGTCTGA GCGCGAACCG GTGAAGCCGG TCGCGACGGC AACGCCTGTG
ACGCAAGCCG ATGCGAAGAC GCAAGCCACC AAGCCGTCCG ACAAGCAACC GGCGGCTGGT
CAACAGGAAG AGGCACGTCT GGACAATAAG TCGCAGGGCC AAGCCTGA
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| Protein sequence | MNGWKTLHSS GIGSALQRRL VAPVGRRLAR AGQVALPRKL RMELNAGGAA ASRNELHPGV
LLVFRSGHVV LNSIGLLAVA AAVALSLNSE WRATVAQRVL HFTPGVDTSV ASANPSPAIA
AGVQPVAFAP TAPSAGTGAA QAVAPAAAQG GTVAAAGWDT LSKVPSVAEL AAQIPNTQVV
RDARESATAG TPREQAAVAE YIARKYRVAA TATGQLVKAA YQTGKEVGLD PLLILGVMAI
ESSFNPFAES GMGAQGLMQV MTKVHQDKYE VMGGVGAALN PYANIKVGAL VLKDCIARAG
SIEGGLKLYV GAVTQGDGGY GGKVLQERSR LRMVATGHRS PMTVASEREP VKPVATATPV
TQADAKTQAT KPSDKQPAAG QQEEARLDNK SQGQA
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