Gene Rpic_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0644 
Symbol 
ID6286471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp684418 
End bp685098 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content69% 
IMG OID642624205 
Productprotein of unknown function DUF306 Meta and HslJ 
Protein accessionYP_001898227 
Protein GI187927740 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3187] Heat shock protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.143261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAC CGAATCGACC CAAGCCGAGC CTGCTGCAAA CGCCGCGCCG CGTGGTGCTG 
ACCGCCGTGG CGCTGGCCGC AGTGACCGCC GCCACCATCA TCGGTGCCGG CTGCATGACG
CCAACGCCTT CATCGTCGCC CGCTGCGGCC GCCCCCGCTG CCGCGTCAGC GTCCGCCGCT
GCAACCAAAC AGACTCCTGC CAACGCCGCA CCCAATACGG GCCAGGCGTC GCTCGCCCAA
GCGCAGGGCG AAGGCCGCTC GCGGTTCGTG CTCGTGCGCT GGCAAGAGTC GGGCGCTGCG
CCCAAGGAAT TGCCCTCCGC CGAAGGCGAC GATACTGACC CGGCTGCGCA GCCGATTTCC
ATCGAATTCA GTGGCGGCCT GGAGGCGGCC AACGGCGTGG TGTCCGGCTA CTCGGGCTGC
AATCGCTTCT CGGGGCCGTA TGAGAAGCTC GCCTCGGGCA TGCGCTTCGG CAACCTGGTG
TCGACGCGCA TGGCGTGCGA CCCGGCGCGT ACGGAGCTGG AGACAGCGTT CCTGGAGGCG
CTCAAATCGC CCTTGGCGAC CGTCGGTATG CAGCCTTCGG CCAGCGGCAC GCAGGGCCGC
CAGGTTATCT GGAAAACGAC CAGCGGCGCG CTGCTGCAGT TTGCCGAGCG CCCGCTGCCG
CCGCGCGGCC AGACACATTG A
 
Protein sequence
MSQPNRPKPS LLQTPRRVVL TAVALAAVTA ATIIGAGCMT PTPSSSPAAA APAAASASAA 
ATKQTPANAA PNTGQASLAQ AQGEGRSRFV LVRWQESGAA PKELPSAEGD DTDPAAQPIS
IEFSGGLEAA NGVVSGYSGC NRFSGPYEKL ASGMRFGNLV STRMACDPAR TELETAFLEA
LKSPLATVGM QPSASGTQGR QVIWKTTSGA LLQFAERPLP PRGQTH