Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0643 |
Symbol | |
ID | 6286470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 683000 |
End bp | 684316 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642624204 |
Product | 3-deoxy-D-manno-octulosonic-acid transferase |
Protein accession | YP_001898226 |
Protein GI | 187927739 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.240114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCG TTCTATATCG CTGGTTGTGG CGCATTGCGC TGCCGTTCGC ATTGCTGCGC CTGTGGTGGC GCGGCCGCAA GGAGCCCGGT TATCGACAGC ATGTCGGCGA GCGGCTTGGC TTCTATCCGC CGCGCCCGAA TCCTGACCGT CCGTTGCTGT GGGTGCACGC CGTGTCCGTT GGCGAGACGC GCGCCGCGCA GCCGCTGATT GATGCCCTGT TGGCGCGCTT TCCGCACCAC GCTGTCCTGC TGACGCACAT GACGCCGACG GGCCGCCGCA CGGGCGCTCA ATTCGCGGCA CAACGCAACC GCCGCGTCAT CCAGGCGTAT CTTCCGTACG ATTTGCCGAG CGCAGTCGAT CGGTTTCTGC GGCATTTCCA ACCGCGCCTT GGCCTGCTGA TGGAGACCGA GATCTGGCCG GTGCTGATCG AGCGCGCCTA TACGGCCGGT GTGCCGATGG TGCTCGTCAA CGGGCGCCTG TCTGCGCGCA GTCACCGGCG TACCGCGCGC CTGGGTGACG CGGCGCGCCA GACGTACGCG CAGCTCGCCG CCGTGCTGGC CCAGACGCCC GACGACGCCG ATCGCTACCG CTCGCTCGGC GTGCCGCGCG TGCGGGTGAC CGGCAACCTG AAGTTCGACA TCACGCCGCA TGTGGACCAG ATCATGGCCG GACGTGCGTT GCACGACGCG CTACGTGGCC GATCGGTATG GGTGGCCGCC AGCACGCGCG AGGGCGAAGA AGCGTTGCTG CTTGACGCGT GGCAGGCGCA TCGCGCGCAG CATGTCGGGC GCCGGCATGC GTTGCTGATT CTTGTGCCGC GTCACCCGCA GCGTTTTGAT GAAGTGGCCC AGGCTGCCGA ACGCGCGGGC TTGCGTGTCG TGCGTCGCAG TGCGTTGTCG GTGTCTGCAG CAGGCGTGAC GGAGTCCGAT CAACTTGCCG ACGCCGACGT TTTGCTCGGG GACTCGATGG GCGAGATGGC ACTGTATTAC GCGGCTGGCG AAGTGGCGTT CATCGGCGGC AGCCTGCTTC CGCTCGGGGG GCAGAATTTG ATCGAGGCCT GCGCGGTCGG CACACCCGTG GTCATCGGCC CGCATACCTT TAACTTCGCG CAGGCGACTC GCGATGCAGT TGCCGCGGGT GCGTGCGAGC AGGTAGGAGA TGCCGCTGCG GCGATACGTG TGATCGACGC GTGGCTGTCC GATGCCGATG CGCGCGAAGC CGCATCACGT GCCGCGCTGG CGTTTGCCGC CACACACGGC GGTGCGACGG CGCGCACGGT GGAAGCGGTG GCATCCCTGG TCTTGCCAAC GCTGTAA
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Protein sequence | MLRVLYRWLW RIALPFALLR LWWRGRKEPG YRQHVGERLG FYPPRPNPDR PLLWVHAVSV GETRAAQPLI DALLARFPHH AVLLTHMTPT GRRTGAQFAA QRNRRVIQAY LPYDLPSAVD RFLRHFQPRL GLLMETEIWP VLIERAYTAG VPMVLVNGRL SARSHRRTAR LGDAARQTYA QLAAVLAQTP DDADRYRSLG VPRVRVTGNL KFDITPHVDQ IMAGRALHDA LRGRSVWVAA STREGEEALL LDAWQAHRAQ HVGRRHALLI LVPRHPQRFD EVAQAAERAG LRVVRRSALS VSAAGVTESD QLADADVLLG DSMGEMALYY AAGEVAFIGG SLLPLGGQNL IEACAVGTPV VIGPHTFNFA QATRDAVAAG ACEQVGDAAA AIRVIDAWLS DADAREAASR AALAFAATHG GATARTVEAV ASLVLPTL
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