Gene Rpic_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0624 
Symbol 
ID6287400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp664533 
End bp665330 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID642624185 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001898207 
Protein GI187927720 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCA TTGATCAGCG CGTGGCAAGT GCGCCCGCCG AGGCCAGCTC GCCGCAGCGC 
AAGCATGTGC GGCGCAAGCT GCGCTTGCTC GTACATCTGG TCGAAGGCCT GATCACGTGC
GCGCTGCTAT TCTGGTGGAT CAAGCCGCAC ACCAAGCAGG CGCTGATTCA GCGGTGGTCG
CGCAAGTTGC TCGCGCTGTT CCGCGTGTCG CTCGTGGTGC ATGGCGAGCC CGTCACGGGC
AAGGAGCTGG CCGGCTCCAT GCTGGTCTCC AACCATGTGT CGTGGATCGA CATCTATGCG
ATCAACAGCT GGTACCCGCC GCGCTTCGTC GCCAAATCAG AGATCCGCAG CTGGCCGGTG
ATTGGCTGGC TGTGCGCGCA GACCGGCGTG CTGTTCGTCG AGCGCGCCCG CAAGCGCGAC
GCGCATCGCA TCATGCACGT CATCGCCGAT GCGATGCGTT CGGGCGATGC CATTTGCGTG
TTTCCCGAGG GTACGACGTC TGACGGGCTG CAGCTGCTGC CGTTCCACGC CAACCTGTTT
CAGGCGCCGG TCAGCGCTGG CGCACCGATC CGCCCGCTGG CGCTGCGCTA TCGCGTCGCC
GCCACTGGCG AATTGACGAT CATTCCCGCG TATATCGGCG ATCTGTCGAT GATGGATACG
ATCAACGCCA TGCTGAACGG GCCGCCGTTG GTGGTGGAAG TGTTCGTAGG CCCCGCCGTA
GCTCCGGAGA TGGACCGCCG TGGGCTGGCC GCACATAGTC ACGACGCTGT TGCCGCGCTG
ATCGACCGCG CGGGCTAG
 
Protein sequence
MTGIDQRVAS APAEASSPQR KHVRRKLRLL VHLVEGLITC ALLFWWIKPH TKQALIQRWS 
RKLLALFRVS LVVHGEPVTG KELAGSMLVS NHVSWIDIYA INSWYPPRFV AKSEIRSWPV
IGWLCAQTGV LFVERARKRD AHRIMHVIAD AMRSGDAICV FPEGTTSDGL QLLPFHANLF
QAPVSAGAPI RPLALRYRVA ATGELTIIPA YIGDLSMMDT INAMLNGPPL VVEVFVGPAV
APEMDRRGLA AHSHDAVAAL IDRAG