Gene Rpic_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0610 
Symbol 
ID6287897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp646030 
End bp647331 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content65% 
IMG OID642624171 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_001898193 
Protein GI187927706 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTC CCTCCCGCAG CGCCGCCCTG TTTGAACGTG CCCAGAAGAC CATCCCCGGC 
GGAGTGAACT CCCCGGTACG CGCCTTCCGC TCGGTGGGCG GCATCCCGCG CTTCATTGCC
AAGGCAGCCG GCCCATACTT GTGGGATGCC GACGGCACGC GCTATATCGA CTACGTCGGC
TCGTGGGGCC CGATGATCGT CGGGCACGCG CATCCGGAGG TTGTGCGTGC TGTGCAGGAA
GTGGCGGCCG ACAGCTTCTC GTTCGGGGCG CCTACCGAGG CTGAAGTCGT CATGGCCGAG
GAAATCTGCA AGCTCGTGCC GTCGATCGAG CAGGTGCGGC TCGTGTCGTC GGGCACCGAA
GCAACCATGA GCGCCCTGCG CCTGGCGCGT GGCTTTACCG GGCGTGACCT GATCGTCAAG
TTCGAAGGCT GCTACCACGG TCACGCCGAC AGCCTGCTGG TCAAGGCCGG TTCAGGCCTG
CTGACGTTTG CCGATACGAC GCAGAACGCA CCGTCTTCCA CCGGCGTGCC GGAAGACGTG
GTCAAGCACA CGATGGTGCT GCCGTACAAC GACGTGGCCG CACTGCGCGA GGCGTTTGCC
CGCCACGGCA AGGAAATCGC CGCCGTGATC GTCGAGCCAG TGGCCGGCAA CATGAACCTC
GTGCGTGGCA GCAACGAATT CCACCAGGCC ATGCGCGCGC TGTGTACCGA ACACGGCGCC
GTGCTGATCT TTGACGAGGT GATGACGGGC TTTCGCGTGG CGCTCGGGTG CGCGCAGGCG
CTGTACGGCA TCAAGCCGGA CCTGACGTGC CTGGGCAAAG TGATTGGCGG CGGCATGCCG
GCGGCAGCCT TTGGTGGCCG CCGCGACATC ATGGGGTTCC TGGCGCCTCT GGGCAGCGTC
TACCAGGCAG GAACGTTGTC GGGGAATCCG CTTGCGGTGG CGGCTGGGCT GACCACGCTG
CGGCTGATTG CTGCGGAGGG TTTCCATGAC CGGCTGGCGA CGCAGACACG CAAGCTGGTA
GACGGGCTGG CGGAAATCGC TCGTGAGGTT GGTGTGCCGT TTGCCGCCGA CAGCGTGGGC
GGCATGTTTG GCATCTACTT CCGCGAGGGC GTGCCGACGA GCTTTGCTGA AGTGACCAAG
AGCGATGTTG GGCGCTTCAA TGCGTTCTTC CACGCGATGC TGGATCAGGG TGTTTATCTG
GCGCCGTCTG CGTTTGAGGC CGGATTTGTG TCTTCCACGC ATGATGATGC GATTCTGGAC
GCGACGTTTG AGGCGGCTCG GAAGGCGTTT AAGGCGGTTT GA
 
Protein sequence
MSTPSRSAAL FERAQKTIPG GVNSPVRAFR SVGGIPRFIA KAAGPYLWDA DGTRYIDYVG 
SWGPMIVGHA HPEVVRAVQE VAADSFSFGA PTEAEVVMAE EICKLVPSIE QVRLVSSGTE
ATMSALRLAR GFTGRDLIVK FEGCYHGHAD SLLVKAGSGL LTFADTTQNA PSSTGVPEDV
VKHTMVLPYN DVAALREAFA RHGKEIAAVI VEPVAGNMNL VRGSNEFHQA MRALCTEHGA
VLIFDEVMTG FRVALGCAQA LYGIKPDLTC LGKVIGGGMP AAAFGGRRDI MGFLAPLGSV
YQAGTLSGNP LAVAAGLTTL RLIAAEGFHD RLATQTRKLV DGLAEIAREV GVPFAADSVG
GMFGIYFREG VPTSFAEVTK SDVGRFNAFF HAMLDQGVYL APSAFEAGFV SSTHDDAILD
ATFEAARKAF KAV