Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0592 |
Symbol | |
ID | 6288424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 627517 |
End bp | 628368 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642624153 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_001898175 |
Protein GI | 187927688 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.579977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0629925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACG CGCGTGCAAT CGTGATGCTG ATCGTCGCAT TGGTAGCGGG GATCGCGGCC GTTGTCTCTG CATCACGTTG GCTGTCTCAG CAGTCAACCA GCTCAGTCAA GCAAGTCGTG GTGGCCGCCA GCGACATGGA CCTCGGCCAA CCGCTGGGCA ATGAGCAGCT GCGCACGGTC AGCTGGCCGG CGGGCAGCTT GCCACCGGGC ACGTTTGACG ACCCCAAGGC GTTGCAAGGG CGCGTGGTGC GCGCCAGCCT GCAGAAAGGC GAACCGATTC TGGAAAACAA GCTCGCGCCC ATCGGTACCA AGGGCGGGCT TTCCGCCGTC ATCGCGGAAG GCAAGCGCGC CATTACCGTA CGTGTGAATG ACGTGGTGGG CGTAGCGGGC TTTGCGCTGC CGGGCAACCT GGTCGACGTG ATCGTCAACA CCAACGAAGA CGCGAAGAGC GCGAGCAACA ATAACAACAG CATTTCCAAG ATCGTGCTCG AAAAGATCCT GGTGCTGGCA GTCGCGCAGC AAGTCAGCCG GGACGATACC CAGCCCAAGG TCGTCAACGC GGTGACGCTG GAAGTCACAC CCGATCAGGC AGAGAAGCTC GATGTGGCGC GCAGCGTGGG AACGCTCTCG CTGGTGCTGC GCAACCAAGT CGACGTGGCC GCCACAGCAA CCGGCGGCGC CACCAAGGGC ACCTTGCTGG GCACGCCCGC AGCCGAGCCC GCACCCAAGG TGGTGATGGT CAGCACGACA CGTGCAACCG CCAAGGTGCG CCACGTTGCC TCGGGCCCGA TCCGGCAGCG CGACTGCATC GGTGTGCTGG CCGGCGTGCA AGGCAGCATG GAATGCTTCT GA
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Protein sequence | MKNARAIVML IVALVAGIAA VVSASRWLSQ QSTSSVKQVV VAASDMDLGQ PLGNEQLRTV SWPAGSLPPG TFDDPKALQG RVVRASLQKG EPILENKLAP IGTKGGLSAV IAEGKRAITV RVNDVVGVAG FALPGNLVDV IVNTNEDAKS ASNNNNSISK IVLEKILVLA VAQQVSRDDT QPKVVNAVTL EVTPDQAEKL DVARSVGTLS LVLRNQVDVA ATATGGATKG TLLGTPAAEP APKVVMVSTT RATAKVRHVA SGPIRQRDCI GVLAGVQGSM ECF
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