| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0584 |
|---|
| Symbol | |
|---|
| ID | 6287855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 618476 |
|---|
| End bp | 618973 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642624145 |
|---|
| Product | TadE family protein |
|---|
| Protein accession | YP_001898167 |
|---|
| Protein GI | 187927680 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4961] Flp pilus assembly protein TadG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.45278 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAC GACAACGACA ACATGGCGTG GCGCTGGTCG AACTGGCCAT CATGCTCAGC
CTGCTGCTGG CCATCACCTT TGGGATAACG GAGTTCGGCC GGGCCATCTA CACCTACAAC
ACCCTGGCAA AGGCCACACG AGACGCCACC CGCTACCTGA GCACGCAGGC CGCCGGCAAC
GCGACCTCCT ATGCGACTGC AACAAATCTG GCGGTCTACG GCACGCCGAC GGTTGGCAGC
AAGCAAGCGC CGCTGGTCCC CGGGCTGACA TCGAGCATGG TGTCCATCTG CGATGCGTCC
AACACGAGCT GCACGTCCAA CATTGCGCAA GGGACCAACC CGGCCATCAA CACCGTCACC
GTCACGATCT CGGGCTACAC GTTCAACCCG GTGATCGACA TGATGGCGTT CCTGCGATTC
TATGCGGGCG GCAAAGGGTC GATCACTTCG TTCCCATTTG GGAACATCTC AGTGACCATG
AGGCAGTCCT ATGAATAA
|
|---|
| Protein sequence | MKTRQRQHGV ALVELAIMLS LLLAITFGIT EFGRAIYTYN TLAKATRDAT RYLSTQAAGN
ATSYATATNL AVYGTPTVGS KQAPLVPGLT SSMVSICDAS NTSCTSNIAQ GTNPAINTVT
VTISGYTFNP VIDMMAFLRF YAGGKGSITS FPFGNISVTM RQSYE
|
|---|
| |