Gene Rpic_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0583 
Symbol 
ID6287854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp617222 
End bp618466 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content60% 
IMG OID642624144 
Producthypothetical protein 
Protein accessionYP_001898166 
Protein GI187927679 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.525477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC ATACCAAACA GAGAGAACGC GGGGCGGTGC TCCCGATGGT GGGCCTGATG 
CTTGCCGTGT TGCTCGGAAT GGCAGGTTTG GTGATCGACC TGAGCGGGTT GTTTGTGGCC
AAGACGGAGC TTCAGTCAGC GGTGGATAGC TGTGCCTTGT CGGCGGCCCA GGAGCTGGAT
GGCGCCTCCG ATGCGCTGAC ACGGGCAACG AATGCGGGGG TGACAGCGGG CAATGCCAAC
CGTGTTGTCT ATCAAGCATC TTCTGCGTCG TTGGCCAATG CTGACGTCAC GTTCAGCACG
GCACTGAACG GCACCTACAG TGCGGCCGGA GTGGCGTCCA GTTCGTCCAG CTATGTCAAG
TGCAAGCACT CAAAAAGTGG GATCACGGCG CGCCTGATCA AGTTCGTTGG CGGTGCCAAC
AGCTATGCCG TTGCCGCGCT GGCGGTCGCC ACGCGTGTGC ATGCGCAGAG CACGTGCCCG
ATTCCGGTCG CCTTGATCCC GAAAACCGGC GGGACGGCAC CCAACTATGG TTTCCAGGTT
GGTGAGTGGG TCAGCATGCT GTACTCAGGC GGCTCTACTA CGCCAGGTGA GATGGGCTGG
TACAACCTCG ACGGCTCCAC CAATGCCAAC GAGACAAAGA CCGAAATGGA TCAGGGCTAC
TGCAATTCCA AGATCGGCGA CCAACTGGGC ACGCCTGGTG CGAAAGTGTC CGTTGACGAC
AATTGGAACG CACGCTTTGG CATCTACAAG AACAAGTCCA ATGCGTCGCA ACTGCAGCCG
GATTTCACGG GCTACTCCTA CACGTCCACC AACTGGACAA ACACGGTGCC GCAGAACGCT
TACAGCGGCA CGCCGGCATC GGGTTCCGAC AAGAGCGCTG CCAACTTCAA GAACAAACGG
CTTGCCTACG CCAACTATGA CGATACCGGT ACGAGTGTTT CCGGCGGCGA CAAGATCACC
GGGCTCAACG TCAAGGGCGG CTACAAAAAC CTCGCTACCA GCGGGAGCAG CGGCGACCTT
GCCACCTATG GGGTGAACCG GCGCGTTGTC CTGGTGCCCG TCATCTCGTC CGCGTCAAAG
ATCATCGACT ACGCCTGCAT GCTGATGTTG CAGCCCATTG ACGGTGTCCA CAACACGCCG
CAGTTCGAGT TCCTGGGCAA CGCAGGGAGC GCCAGCAGCC CGTGTTCACC CAGTGGTCTG
GCAGGCGGCA GCAAGGGCCC TTTGGTTCCA GCATTGGTGC AGTAG
 
Protein sequence
MRTHTKQRER GAVLPMVGLM LAVLLGMAGL VIDLSGLFVA KTELQSAVDS CALSAAQELD 
GASDALTRAT NAGVTAGNAN RVVYQASSAS LANADVTFST ALNGTYSAAG VASSSSSYVK
CKHSKSGITA RLIKFVGGAN SYAVAALAVA TRVHAQSTCP IPVALIPKTG GTAPNYGFQV
GEWVSMLYSG GSTTPGEMGW YNLDGSTNAN ETKTEMDQGY CNSKIGDQLG TPGAKVSVDD
NWNARFGIYK NKSNASQLQP DFTGYSYTST NWTNTVPQNA YSGTPASGSD KSAANFKNKR
LAYANYDDTG TSVSGGDKIT GLNVKGGYKN LATSGSSGDL ATYGVNRRVV LVPVISSASK
IIDYACMLML QPIDGVHNTP QFEFLGNAGS ASSPCSPSGL AGGSKGPLVP ALVQ