| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0564 |
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| Symbol | |
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| ID | 6288714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 598044 |
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| End bp | 600356 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642624126 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001898148 |
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| Protein GI | 187927661 |
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| COG category | [H] Coenzyme transport and metabolism
[S] Function unknown |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein
[COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.432239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACACGT CCGCCCACAC CGCTCCGAAG CTGCTGATCC TGGCCGACGA CCTGTCGGGC
GCCGCCGATT GCGCGGTGGC CGGCGTGCGG GCCGGATTGC GCAGCGCGGT CATGCTGCGC
GCCGATGTTG GACACCCCAT CGGGTATCCG ACCAGCGCCG ACGTCCTCGC ACTGGACACC
GACACGCGGC GCGCCAATGC CGTCGATGCG GCGGCCACGC AGGTGGCGGC ATGGCATGCA
CTGGCCCGGC CGGCCACGCG GCTCTACAAG AAGATCGATT CGACCCTGCG CGGCAACGTC
GCTGCTGAGG TGGCCGCGCT TGCACCGCTG GCGGGTCTGG CCATCGTGGC GCCGGCGTTT
CCGGCAGCCG GACGCACCAC CCGCGACGGC CGCCAGTGGC TGCACGGCGT GGCCGTGGAA
GACACCGAGG TGTGGCGCAA CGAAAGCATC GGCGGCCGCG CCGATCTGCG CGTCATGTTG
GAGCGCCAAG GCCTTCAGAC CGCCGTGCTG ACGCTTGACG ACATCCGCGC CGGTGCCGCC
GCGCTGGCCG GTCGCCTGGC GGCACTACAG GCGGACGGTG TGCAAGCCGT GGTGTGCGAC
GCCCAGACCG ATGACGACCT CGCGCACATC GCCGAGACCT CCGTGCGGCT GGCGCATGTG
TTCTGGGTCG GCTCCGCCGG TCTGGCGCCC GCGCTGATTC GCGCGGCGGG GCTCGGCAGC
GCCAACGCCG CTGTCGAAGG CGATGCGGCA ACCGCAATCG CCGGGCCGGT GCTGACGGTG
GTGGGCAGCA TGTCCAGCGT GTCCCATGCG CAGGCGTCGG AATTGAAGGC CGCTGCCGGT
GCGCGCCTGC TGTCGCTGGA GCTGCCCGTG GAAGAGCTCG ACACACCGCA GGCGGACATC
ACCCAGACCG TCATCGATGC GCTGTGCGAA GGCCGCGACG TGCTGGTCAC GCTCAGCCAA
ACCACGCGCG GCAACAGCGC CGACGGCCTG CACTTCTGCC GCCGCCTCGC CACGTTGCTG
GCGCCGGCTT TGCCGCATGC CGGCGGGCTG ATCGCCACCG GCGGCGAGAC CGCGCGCGCC
GTGCTGTCGA CCGCCGGCAT CGACGCGCTG CGCCTGTGCG ACGAAATCGA ATCCGGCATG
CCGCTGCTGC ATGCCCAACT TACTGGCGTC GGCGGCGTGC TGCCGGTCGT CACCAAGGCG
GGGGGCTTCG GCACACCCGG CTCCCTGCAT GCCGCTTGGC GACGGTTGAT CGAAACCGCA
GCCAGCACCC CACCCAAAGG AACTCACGCA ATGACCTATC GTCCTGTCAT CGGCATCACC
ATGGGCGATG CCGCCGGTGT CGGCCCCGAG ATCATCATGA AGGCGCTCAC ACACCGCGCG
GTGTACGAGC AATGCCGACC TCTGGTGATT GGCGACACGG CACGACTGCG CGATGCCGCC
CAACGTACCG GCGCGGCACT GGAAGTTCGC TCGATCGAGC GCCCTGCCGA CGCCGCCTTC
CGCTACGGCG TAGTGGACTG CATCGACCTC GGCCTCATTC CTGCCGACCT GCCCTACGGC
AAGCTCTCTC CCATCGCGGG CGATGCCGCG TATCAGTACA TCGCCCGCAC CGTCGAGCTG
ACGTCCGCTG GCGAACTGGA TGCCATCTGT ACCGCGCCGC TGAACAAGGA AGCGCTGCAC
GCCGGCGGCC ACATCTTCCC GGGCCACACC GAAATGCTGG CGCACCTGAC CGGCATCGAT
GAGGTTTCGA TGATGCTCGT GGCGCCCAAC CTGCGCGTGA TCCACGTGAC GACCCATATC
GGGCTGCTAG ACGCCATCCG CCGCATCGAG CCGGGCCTGG TCCAGCGCAC CATCGAACGC
GCGCACGCCA CGCTGGTACG CGCCGGCATC GAGAACCCGC GCATCGGTGT CTGCGGCATC
AACCCGCATG CGGGAGAAAA CGGGCTGTTC GGCCATGGCG AAGAAGAGCA AAAGATCATC
CCCGCCGTGC AGGTGCTGCA GGCACGCGGC TGGCGCGTAG AGGGCCCGCT GCCCGCCGAC
ACGCTGTTCT TCCGCGCCGG CCGTGGCGAC TTCGATGTGG TGGTGGCGAT GTATCACGAC
CAGGGCCACG GACCGGTCAA GGTGATGGGC CTGGAAGCCG GTGTGAACGT CACCGTGGGC
CTGCCGGTAA TCCGTACTTC GGTCGACCAT GGAACCGCGT TCGACATTGC CGGCAAGGGC
ATCGCCGATG AACGCAGCAT GCTCGAAGCG TTTCGCCAGG CCTGTGAACT CGCCACCCGA
CACGATGACC CGCAAGCCGT ACGTGCGGCC TGA
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| Protein sequence | MNTSAHTAPK LLILADDLSG AADCAVAGVR AGLRSAVMLR ADVGHPIGYP TSADVLALDT
DTRRANAVDA AATQVAAWHA LARPATRLYK KIDSTLRGNV AAEVAALAPL AGLAIVAPAF
PAAGRTTRDG RQWLHGVAVE DTEVWRNESI GGRADLRVML ERQGLQTAVL TLDDIRAGAA
ALAGRLAALQ ADGVQAVVCD AQTDDDLAHI AETSVRLAHV FWVGSAGLAP ALIRAAGLGS
ANAAVEGDAA TAIAGPVLTV VGSMSSVSHA QASELKAAAG ARLLSLELPV EELDTPQADI
TQTVIDALCE GRDVLVTLSQ TTRGNSADGL HFCRRLATLL APALPHAGGL IATGGETARA
VLSTAGIDAL RLCDEIESGM PLLHAQLTGV GGVLPVVTKA GGFGTPGSLH AAWRRLIETA
ASTPPKGTHA MTYRPVIGIT MGDAAGVGPE IIMKALTHRA VYEQCRPLVI GDTARLRDAA
QRTGAALEVR SIERPADAAF RYGVVDCIDL GLIPADLPYG KLSPIAGDAA YQYIARTVEL
TSAGELDAIC TAPLNKEALH AGGHIFPGHT EMLAHLTGID EVSMMLVAPN LRVIHVTTHI
GLLDAIRRIE PGLVQRTIER AHATLVRAGI ENPRIGVCGI NPHAGENGLF GHGEEEQKII
PAVQVLQARG WRVEGPLPAD TLFFRAGRGD FDVVVAMYHD QGHGPVKVMG LEAGVNVTVG
LPVIRTSVDH GTAFDIAGKG IADERSMLEA FRQACELATR HDDPQAVRAA
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