Gene Rpic_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0547 
Symbol 
ID6287055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp587072 
End bp587935 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID642624112 
ProductNmrA family protein 
Protein accessionYP_001898134 
Protein GI187927647 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCC TCGTTACTGG TGCTACCGGC CGCGTCGGCC GCCAAGTCGT CCATCAACTT 
GCCAACCGCG GTGCGGACGT GCGCGCGCTG GTGCGCGACC CGTCAAAGGC CGACTTCCCG
GCCAGCGTGA ACGTCGTGCA GGGCGACATG CTGGATCTCG ACTCGCTCCG GCGTGCCTTC
GTTGGTGTCC GGACGCTGTT CCTGCTCAAC GCGGTCGCGG GGGACGAATT CACCCAGGCG
CTCATTGCAC TGAACGTTGC CCGCGAATCG GGCGTTGAGC GCGTCGTCTA TCTGTCCGTC
ATGCATGCCG AGCGCTTCGT GAACGTGCCG CACTTTGCGG TGAAGTCCGG CGCGGAACGC
ATGATCGAGC AGATGGGCTT CAGCGCCACC ATCCTGCGTC CGGCCTACTT CATGGACAAC
GAGCACATGG TCAAGGACGT CATCGTCAAC CATGGTGTCT ACCCGATGCC GATCGGCAGC
AAGGGGGTTG CGATGGTCGA CACGCGCGAC ATCGCAGAAG TCGCGGCCAT CGAGCTGATC
CGCCGGGACG CGGCACCGGG CAAGCTGCCG GTCGAGACCA TCAACCTCGT GGGCCCCGAT
ACGCTGACGG GCCCCGAACT GGCCTCGATC TGGACAGAAA CGCTCCGCCG CCCCGTGGCC
TACGGCGGCG ACGACCCGAC CGCATTCGAG AGCAACCTGA CCAACTTCCT GCCCAAATGG
ATGGCTTATG AGATGCGCCT GATGGCCGAA CGCTATGTCA GCGACGGCAT GGTGCCGCAG
GCGGGCGATG TCGAGCGCCT GACCAGCATT CTGGGGCGGC CGCTGGGCAC GTATCGCGAT
TTCGCTGCGG CGCTTGCGCA GTGA
 
Protein sequence
MTILVTGATG RVGRQVVHQL ANRGADVRAL VRDPSKADFP ASVNVVQGDM LDLDSLRRAF 
VGVRTLFLLN AVAGDEFTQA LIALNVARES GVERVVYLSV MHAERFVNVP HFAVKSGAER
MIEQMGFSAT ILRPAYFMDN EHMVKDVIVN HGVYPMPIGS KGVAMVDTRD IAEVAAIELI
RRDAAPGKLP VETINLVGPD TLTGPELASI WTETLRRPVA YGGDDPTAFE SNLTNFLPKW
MAYEMRLMAE RYVSDGMVPQ AGDVERLTSI LGRPLGTYRD FAAALAQ