| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0546 |
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| Symbol | |
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| ID | 6287054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 585332 |
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| End bp | 586831 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624111 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001898133 |
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| Protein GI | 187927646 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTTC GCCCCCTCGC CCGACGGCTG GCCACATCGG CAGGCCACCA TCCCTTTGTT
GTTGGTGCGC TGGGGACGCT GCTCACATTC ATTGTCCTGG CAATCAGCGT GCTGACCCTT
TGGGCCAACC GCGAAACGGC CATCGAGCAC GCACACGACA CCTCGAAGAA TGTCGCTGCC
GTTCTGGCCA GCCACATTTC GCGCACCGTT GAATCGGCAG ATCAATCGCT GCAGACGCTG
ATAGGCGCAC TCGACAAACC CGGCATCCGC AACCTCGATC CGCAGGTTCG GCACGATCTG
CTGTTCAGCC CGACGGCCTC TGCCCGGTAT GTCACCGGCA TGGGCGTGAC CGACGACAAG
GGCCAGCTCG TCGACGGATG CTGCTCCTTG ACCCACCGCT GGGATTTCAG CGACCGCGAC
TACTTTATCG TCCATCGCGA GCACGCAAAC CTTGGCCTTT ATGTGTCCGG CGTCTATAAG
GCCCGGTCAC GCGCAGGCGT GGAGGCCATC GCCCTGAGCC GAAGAATGAA CCGACAGGAT
GGGACGTTTG CCGGCACCGC GCTAGTGGCG ATCGACCTCG ATTACTTCCG GCAGCTTCTT
GAAAGGCTTG ATGTCGGGCC GCGCGGCATC ACGGCCATTG TCCGCACCGA CGGCACGCTA
ATGGCGCGAA ATCCGCCCGG CGCAGCCCGC GCGTTCAATC TGAGCAAATC GTTGACGTTC
CCGCGCATGG TGAATCAGGA GTCCGGCTTC TATGTAGCAC CGTCGGCCAG CGATGGCGTG
GTGCGCCTCT ATACGTTTCA ACGTGTGCCG GGCACCCCCT TCATCGCCGT GGTGGCCCCG
GCAATGAGCG ATGCCCTTGC AGCTTGGCAG CGGCTGTCAT GGATCGTAGG GTTGTCGTCG
CTGTCGGTGA GTCTTGCGTT CTGCGCAGGT GTCTGGCTCC TGGCTTTTGC GCTGCGGGGC
CGCGTGATGG CGGAAAACCA CCTGCGCGAG CTTACGCAAA CCGATCCGCT CACCGGGTTG
AAGAACAGGC GCGCCCTGGA TGTCGCGCTG GAGAACGAGT GGGATCGGCT GCAACGGAAT
GACAGTCGGC TGTCCGTGCT CTTTATCGAT GCCGATCACT TCAAACGCTA TAACGACGCG
CACGGCCATG CTCAGGGCGA CGTCGCGCTT CAGTACCTCG CCCAGTGCAT TTCCAAGCAT
GCGCGACGAC GCGGCGACCT GGCGGCCCGA TACGGCGGAG AGGAATTCGT GGTGCTGTTG
CCCGATACGG ACGAAGCGGG TGCCACGCGG ATCGCCGAAG CGATCCGTGC CGAAGTGGAA
GGCGCCGGCG CGTCCGTCGG CGACGCAGGT TTGGCCCCCT TCACCGTGAG CGTCGGTTGC
GCGACCGCGC GGCGCGCGAG CTTCCCGTCG CTGAACGCAT TGACCAAGGC TGCGGACGAT
GCGCTCTACG AAGCCAAGCG TAAAGGCCGC AACCGCATTG ACTACGCCAC GGTTGGCTAG
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| Protein sequence | MHLRPLARRL ATSAGHHPFV VGALGTLLTF IVLAISVLTL WANRETAIEH AHDTSKNVAA
VLASHISRTV ESADQSLQTL IGALDKPGIR NLDPQVRHDL LFSPTASARY VTGMGVTDDK
GQLVDGCCSL THRWDFSDRD YFIVHREHAN LGLYVSGVYK ARSRAGVEAI ALSRRMNRQD
GTFAGTALVA IDLDYFRQLL ERLDVGPRGI TAIVRTDGTL MARNPPGAAR AFNLSKSLTF
PRMVNQESGF YVAPSASDGV VRLYTFQRVP GTPFIAVVAP AMSDALAAWQ RLSWIVGLSS
LSVSLAFCAG VWLLAFALRG RVMAENHLRE LTQTDPLTGL KNRRALDVAL ENEWDRLQRN
DSRLSVLFID ADHFKRYNDA HGHAQGDVAL QYLAQCISKH ARRRGDLAAR YGGEEFVVLL
PDTDEAGATR IAEAIRAEVE GAGASVGDAG LAPFTVSVGC ATARRASFPS LNALTKAADD
ALYEAKRKGR NRIDYATVG
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