| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0522 |
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| Symbol | |
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| ID | 6286658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 558979 |
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| End bp | 561162 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624087 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001898109 |
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| Protein GI | 187927622 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.569695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCGT TCCAGCCCAG CAAGCTGGTG ATGGCGCTTG CCGCCGTCCT GCCGTCCGTC
GCCTCGGTTT CCGCCCTGGC TCAGGAGGCC ACGCCGCCGG CCGCCGCTCC TTCCACGCCC
ACCACGACGG CACCCGCCAC CAACGTGCGC GACCTCAGCG AAACCCGCGT CACGGCCAAG
CGCTTGGACG CCGCACGCAA TGCGCTGTCG CCGGACACCG GCAGCTCCGT CTACAAGTTC
GACACCGATG ACATCGCCCG CCTGCCGCTG GGCGATGCCA CGCCGCTCAA CCAAGTGCTG
CTGCAGGCGC CGGGTGTGGT GCAGGATTCG TACGGTCAGT TGCACGTGCG CGGGGACCAC
TCCAACCTGC AGTACCGCAT CAATGGCGTG ATCGTGCCTG AGCCGATTAG CGGTTTCGGG
CAGATGCTCG ATACACGCTT CGCCAACCAG ATCAACGTGT TGACCGGCGC ACTGCCCGCG
CAGTACGGTT ACCGCACCGC CGGCATCGTC GACATCACCA CCAAAGGCGC ATCGACCGAT
GAGGATGGCG AGCCGAAGGC CTTTGGCGGC GAGATCGGCA CGGTGCTCGG CAGCAATGCC
ACGCACGAGG TCAATGCGCA GATCCAGGGC ACGAAAGACC GCTTCAGCTA TTACCTGTCG
GGCGTGTTTG CCGAGAACAA CCTCGGCATT GAAAACCCCA CCGGCAACCG CAACGCCACG
CACGACCACA CCACGCAAAA CAAGTCGTTC GGCATGCTGT CGTACCTGCT CGACAACGAC
AGCCGCGTGA GCTTCATGTT CGGCACATCG AACGGCCGTT TCCAGATTCC GACGCGACCG
GGCCTGACGC CGAAATTCAC GCTCGATGGC GCGGTGCCGC CGGCGTCGGA AGCCCTCAAC
GCCAATCAGC GTGAGAAGAC CGACTTCCAG ATTCTGACGT ATCAGCAGAA GGTGTCGCCC
AAGCTCGACT ACCAGGTGTC GGTCTTCCGC CGTGTCAGCC GCATCGATTA CATGCCCGAT
CCGATCGGTG ATCTCGTCTA CAACGGCGTG GCCGCCGACA TTACCCGCCG CAACGAGGCT
TACGGCGTGC AGGGCGATGC GAGCTACAAG CTGACCGACA AGCACACGCT GCGTGCCGGT
GTGTTCGTTC AGCGCGAGCG CTACGTGGCC AACAACACCG CCAGCGTGTT TGCCGCCGAC
GACTCCGGTG CGCAGACCAG CACCACGCCG TTCACCATCG TCGACAACCA CAGCGGCAGC
GGCACGACCC TGGGCGTCTA CCTGCAGGAT GAGTGGAAGC CCACCGACAA GCTCACCGTC
AACTACGGCG CGCGCTACGA CCGCGTCAAC ACCATCGTCA GCGAGCAGCA ACTGAGCCCG
CGCCTTGGCC TGACGTACGA CCTGACGCCG CGTACCCGCG TGCATGCCGG CTACGCGCGC
TACTTCACGC CGCCGCCCAC GGAGAAGTTC GACACCACGT CGGTGCAGGC CTTTGCAGGC
ACGACCAACG CGCTGCCGTC GGACGCCAAC ACGGCCGTCA AGTCGGAGCG TTCGAACTAC
TTTGATCTGG GGATTTCGCA CCAGCTCACG CCGCATCTGA CGCTGGGTCT GGATGCGTAT
TACCGCGACG TGCGCCATCT GCAGGACGAA GGGCAGTTCG GCAACGCGCT GCTGTACTCG
GCGTTCAATT ACGAGCGTGG CCGGATCTAC GGGCTGGAAG GCAGTGCGAA CTATCGCAAC
GGCAACTTCG GGGCATACCT GAATCTGGCC GTGTCGCGCG CGCAGGGCAA GGGCATCGAG
ACCGGCCAGT TCAACTTTGG TGCCAACGAG CTGGCCTATA TCAACAGCCA TTGGGTCAAC
CTCGATCACG ACCAGCGCCT GACCGCGTCG GCTGGCGTGT CGTACCGGTA TTCCGGCACG
ACGTATACGA GCGATGTGCT GTTCGGAACG GGCTTGCGTA ACGGCTTTGT CAACACCGAC
CACCTGCCGG CCTACTGGCA GATGAACGTG GGCGCCGCCC GCGACTTCAA CCTGCCGACG
CTGGGCAAGT TCAAGACGCG CCTGACCGTG CTGAACATCT TCGACCGCAG CTACCAGTTG
CGCGACGGCA CGGGCATCGG CGTGGGGGCG CCGCAGTTTG CACCGCGCCG TACGTTCCTG
TTGTCGGTCA GCAAGCCGTT CTAA
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| Protein sequence | MIPFQPSKLV MALAAVLPSV ASVSALAQEA TPPAAAPSTP TTTAPATNVR DLSETRVTAK
RLDAARNALS PDTGSSVYKF DTDDIARLPL GDATPLNQVL LQAPGVVQDS YGQLHVRGDH
SNLQYRINGV IVPEPISGFG QMLDTRFANQ INVLTGALPA QYGYRTAGIV DITTKGASTD
EDGEPKAFGG EIGTVLGSNA THEVNAQIQG TKDRFSYYLS GVFAENNLGI ENPTGNRNAT
HDHTTQNKSF GMLSYLLDND SRVSFMFGTS NGRFQIPTRP GLTPKFTLDG AVPPASEALN
ANQREKTDFQ ILTYQQKVSP KLDYQVSVFR RVSRIDYMPD PIGDLVYNGV AADITRRNEA
YGVQGDASYK LTDKHTLRAG VFVQRERYVA NNTASVFAAD DSGAQTSTTP FTIVDNHSGS
GTTLGVYLQD EWKPTDKLTV NYGARYDRVN TIVSEQQLSP RLGLTYDLTP RTRVHAGYAR
YFTPPPTEKF DTTSVQAFAG TTNALPSDAN TAVKSERSNY FDLGISHQLT PHLTLGLDAY
YRDVRHLQDE GQFGNALLYS AFNYERGRIY GLEGSANYRN GNFGAYLNLA VSRAQGKGIE
TGQFNFGANE LAYINSHWVN LDHDQRLTAS AGVSYRYSGT TYTSDVLFGT GLRNGFVNTD
HLPAYWQMNV GAARDFNLPT LGKFKTRLTV LNIFDRSYQL RDGTGIGVGA PQFAPRRTFL
LSVSKPF
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