| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0510 |
|---|
| Symbol | |
|---|
| ID | 6287793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 547462 |
|---|
| End bp | 548784 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642624075 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001898097 |
|---|
| Protein GI | 187927610 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.170937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.137967 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAA CCCAAGCCCT TCCGGCCAAC CCAACAGACC CGACCAGCCA GTCCATCCCC
AGCACCGAGC TGGATGTCAC CTACCGGCGC ATTGCGTATC GGCTGGTGCC GTTCCTGGTG
GTGCTGTTCA TCCTCGCGTG GATCGACCGC GTCAATGTCG GCTTTGCCAA GCTGTCGATG
CTGCAGGATC TGCAGTTCAG CGAAGCGGTG TACGGCCTGG GCGCGGGCAT CTTCTTCATC
GGCTACTTCC TGTTTGAAGT GCCGAGCAAC CTGCTGCTGG AAAAGATCGG CGCCCGCAAG
ACGCTGGCAC GCATCACCAT CCTGTGGGGC CTGGCCTCGA TGGCGATGAT CTACGTGAAG
ACGCCGACCT CGTTCTACGT GATGCGCTTT CTGCTGGGCA TCTTTGAAGC CGGCTTCTTC
CCGGGCGTGG TGCTGTACCT GACGTACTGG TTTCCCTCCG CACACCGCGC GCGCATCAAC
GGCCTGTTCA TGACGTCGTT TGCGATTGCG GGCGTGGTGG GCGGCCCAGT TGCGGGTTTC
ATCATGAGCC GCATGGAAGG CGTGGGCCAC CTCGCCAACT GGCAATGGCT GTTCCTGCTC
GAAGGCATTC CTTCCGTGCT GGCCGGCTTT GCCGTGCTTG CATGGCTGCC CGAAACGCCT
CGCCAGGCCA AGTGGCTTTC CGCTGCCGAG CAAGACGCCG TCGTCCGCGC CGTTGAAGCG
GAGAATCGCG ACCCTGCCAA GCACGCCTCG TTTGGTGCGG CACTCGCCAA CGCCCGCGTG
TGGGTCTGTG CAGCCATCTA CTTCTGCGTG GTCAGCGGCA ACGCCACCAT CGCGTTCTGG
ACGCCGTCGA TCATCAAGGA GCTGGGCGTG CAGGGCAATT TCCAGATCGG GCTGATCTCG
GCCATTCCGT TCATCGCCGG CACGATTGCG ATGGTGTGGA ACGGCGCGCA TTCCGACCGC
ACGGGCGAAC GCCGCATGCA CTGCGCCATC GCCGCCCTCA TCGCCAGCGC CGGCCTGGTG
GCGACAGGCG CTACGCTGGG CTCGCCGTTT CTGGCGCTGG TCTCGCTGAC GGTCGCCGCC
ATCGGCATCC TCGCCGCGTT CCCGGTGTTC TGGTCGATCC CGGCCGTGTT CCTGGCCGGC
ACCGCAGCCG CAGGCGGCAT CGCCCTCATC AACTCCATCG GCAACCTCGC CGGCTTCGTC
GCGCCGTACA TGATCGGCTG GCTGAAGACA AGCACCGGCC ATCTCTCCGC CGGCCTCTAC
TTCGTAGCCG CGCTGGAGCT GGGCGCCGCC GTGCTGGTCA TCCTAGGCAC GCGCAAACAC
TAA
|
|---|
| Protein sequence | MSQTQALPAN PTDPTSQSIP STELDVTYRR IAYRLVPFLV VLFILAWIDR VNVGFAKLSM
LQDLQFSEAV YGLGAGIFFI GYFLFEVPSN LLLEKIGARK TLARITILWG LASMAMIYVK
TPTSFYVMRF LLGIFEAGFF PGVVLYLTYW FPSAHRARIN GLFMTSFAIA GVVGGPVAGF
IMSRMEGVGH LANWQWLFLL EGIPSVLAGF AVLAWLPETP RQAKWLSAAE QDAVVRAVEA
ENRDPAKHAS FGAALANARV WVCAAIYFCV VSGNATIAFW TPSIIKELGV QGNFQIGLIS
AIPFIAGTIA MVWNGAHSDR TGERRMHCAI AALIASAGLV ATGATLGSPF LALVSLTVAA
IGILAAFPVF WSIPAVFLAG TAAAGGIALI NSIGNLAGFV APYMIGWLKT STGHLSAGLY
FVAALELGAA VLVILGTRKH
|
|---|
| |