Gene Rpic_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0484 
Symbol 
ID6289119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp517490 
End bp518566 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content67% 
IMG OID642624049 
Productalpha/beta hydrolase fold 
Protein accessionYP_001898071 
Protein GI187927584 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACC CGTCTCGCCA CGCCACTCCC TTTGAACTGA ATCTGGGCGC CCTGCTCGCA 
GGGCCGTTCG AGCCGCACGC GTTCCGTTCG CCGTGGTGGC TGATCGGCGG CAATGCACAG
ACGATCGTGC CCGCGCGCCT ATGGCGCTTT CCGCGCATTG CGTATCGGCG CGAACGCTGG
GACACGCCCG ACCACGACTT CATCGACCTC GACTGGACCA CGCACGAGAC CGACGCGCAC
GCACCGCTCG TCGTCATGTT TCATGGCTTG GAGGGCGATT CGCGCAGCCA TTACGCGCGG
CTGCTGATGG ACGCGCTGCG CGCGCGCCGC TGGCAAGGCG TCATTCCGCA CTTTCGCGGG
TGTTCGGGCG AGATGAACCT CGCGCCGCGC ATGTACCACT GCGGCGATGG CGCCGAGATC
GCGTGGATCC TCGAACGCCT TTACCGGACG GTTTGCCAGC CGCAGAGCCG CAAGCTGCTG
GTTGTCGGCA TCTCGCTGGG CGGCAACGCG CTGCTGCGCT ACCTGGGCGA GCACGGCACC
GATGCCCGCT ACGTGAGCGC CGCGGCGACG GTCTCCGCGC CACTGGACAT GCGGGCCGGC
GGCGCAGCGT TGTCCAAGGG CTTCAACATG GTCTACACGC GCATGTTCCT GCGCACGCTC
AAAGACAAGG CCAACGCCAA GCTCGACCAG CATCCCGGCC TGTACGACCG CGCCGCCATG
ATGGCCACGC GCACGCTGGG GCAATTCGAC AACCTCGTCA CCGCGCCGCT GCACGGTTTT
CGTGACGTGC TCGACTACTG GACGCGCGCC TCGTCCAAAC CCGTGCTTCG CGAGGTTCGC
GTGCCGGTGC TGGTGCTGAA CGCGCGCAAC GATCCGTTCC TGCCCGGACA GCATCTGCCC
GGCATGGCCG ACGTGTCCCC CGACATCACG CTGGACCAAC CGTTGCACGG CGGCCATGTC
GGCTTCCTGC TGCGTCATGG CAAGACGGGC CGCGTCGATT GGATGCCCGC ACGGGTCCTG
CGCTTTTTCG ATGATGTACT GGGCCACCAA GCCAACGCGG AGGACGCTCA TGGATGA
 
Protein sequence
MTHPSRHATP FELNLGALLA GPFEPHAFRS PWWLIGGNAQ TIVPARLWRF PRIAYRRERW 
DTPDHDFIDL DWTTHETDAH APLVVMFHGL EGDSRSHYAR LLMDALRARR WQGVIPHFRG
CSGEMNLAPR MYHCGDGAEI AWILERLYRT VCQPQSRKLL VVGISLGGNA LLRYLGEHGT
DARYVSAAAT VSAPLDMRAG GAALSKGFNM VYTRMFLRTL KDKANAKLDQ HPGLYDRAAM
MATRTLGQFD NLVTAPLHGF RDVLDYWTRA SSKPVLREVR VPVLVLNARN DPFLPGQHLP
GMADVSPDIT LDQPLHGGHV GFLLRHGKTG RVDWMPARVL RFFDDVLGHQ ANAEDAHG