| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0462 |
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| Symbol | |
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| ID | 6287084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 493734 |
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| End bp | 495053 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642624026 |
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| Product | integrase family protein |
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| Protein accession | YP_001898049 |
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| Protein GI | 187927562 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.853167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.68742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAAGA TCCCCCGCCT TCTCCGGTCC CGTCACGGGG TCTACTACCT GCGCCTCACG
CACGGCAAAA CCGACACTCG CCGCTCTCTC GGCACAAAAG ATTTCCAGCG GGCTAAACTG
TCCGCTTTGT TACTGAACGT GCACGTTGAG ATGAGCAAGT CGCGCCTTGA TGCTGAGATG
TTCCGTCACC TCGATATCGC GCTGCCGAAC GGGGTCAAGC TCACGAATAT CCAGCCCGAG
GACAAGGGCA TTCTGTTCGA CATTCTCGAC AAGCTCGGCG TGACAGGCGA ACAGCTCGCC
GCGATGCCAA CAACGGAAGT TGCCAGGCTA CTGGCCGGTC CCGAGCCTCA GCGCATGGAG
CCGCCGAAAC CGAAGAGCAA GCCGCTCTCC GACGTCATTG CGCTCTACCT CACAGAAAAG
AAGCTCGATA ACGTAGCGAA AACACTGGAG GACAAGGAAC GCACCTTTAC CGAGTTCCAG
GGGTTCTTCC AGGACAGCGA TATCAACGCC TTTGATGCCG ATACCGCAAT CGCCTACAAG
AACCGGCTGC TCGCCGCCAA TGCGTCGGCC AGCCGAATCA ATGCGAAGAC CTCGTTCCTG
AGGGATCTCT TCGCATACGC AATCAACAAT AACCTGTACT TCACCACCAA CCCGTTCGAG
AAGGTCCGCG TCTCGAGCAA AACCAAGCTA AAACAACAAG TGGAATCCTA TCGAGAATTC
ACGGACGACG ATCTCAAGCT GATCTTCGCC GAGGCACCGT ATCGGGAGTT CATGAACAAG
CCCGACTATC ACTGGTTGCC GCTGCTTGCC CTCTACACGG GTGCTCGGGT CGAGGAGCTG
GCAAGCCTGT CGCTGAACCA GATCAAGAAG GATGGCGGTA TTCACTACTT CGAGATCGAG
AAAGCCAAGA ACCTCAATTC GATCCGCAAA ATCCCGCTAC ACCGGCAGAT CGAAACCTCG
GGATTCCTGG CCTACGTGGA CAGCGTGCGC GCTCAAGGTG CGACGATGCT GTTTCCCCAC
CTGACAGCGG GCAAGAACGG CTACAGCAAG AATATGTCGC GCCGATTCGG GGCTTACCTC
GACTCGCTGA AGATCAGCGA TTCCCGCAAG GTGTTTCACT CGTTCCGCCA CACGTTCATT
ACTCGTATGA CGGAATTGAA CGTCCACCCG GTGCTGGTCA TGTCCATGGT GGGGCACTAT
GCGCAGGCGA AGGTGGATCT TTCTGCGCCG CACGTCGTCA ATTATCAGCA CGAGAAGCCG
TTATCCGTTT TGAAGCAGAC CATTGACCGG CTGGAATTCC CGATCAAGCA TTTCTGGTAA
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| Protein sequence | MHKIPRLLRS RHGVYYLRLT HGKTDTRRSL GTKDFQRAKL SALLLNVHVE MSKSRLDAEM
FRHLDIALPN GVKLTNIQPE DKGILFDILD KLGVTGEQLA AMPTTEVARL LAGPEPQRME
PPKPKSKPLS DVIALYLTEK KLDNVAKTLE DKERTFTEFQ GFFQDSDINA FDADTAIAYK
NRLLAANASA SRINAKTSFL RDLFAYAINN NLYFTTNPFE KVRVSSKTKL KQQVESYREF
TDDDLKLIFA EAPYREFMNK PDYHWLPLLA LYTGARVEEL ASLSLNQIKK DGGIHYFEIE
KAKNLNSIRK IPLHRQIETS GFLAYVDSVR AQGATMLFPH LTAGKNGYSK NMSRRFGAYL
DSLKISDSRK VFHSFRHTFI TRMTELNVHP VLVMSMVGHY AQAKVDLSAP HVVNYQHEKP
LSVLKQTIDR LEFPIKHFW
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