Gene Rpic_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0438 
Symbol 
ID6288492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp467686 
End bp469287 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content63% 
IMG OID642624002 
Productphage integrase 
Protein accessionYP_001898025 
Protein GI187927538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0285557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000141533 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAAAAAC AGAATTACCT CGTTCGCCGC GAGTCCAGCG CGCACTACTA TTTCCGACGC 
GCCGTCCCGC CACACCTGCG CGCCTCGCTC GGCAAGCGCG AAATCGTCAT CTCACTGCGC
ACCCGCGACC GGCGCACCGC CGAAGTCCGC GCGCGACAGC ACGCCGTCAG TACCGATGCC
GAATTCCTGC TGCACGAGCA ACTCGTGCAC AATCAGGGCA ACGCGCATCC CGACGAGACC
GTCGGGCTTT CCCGGCCACT GGAACCTCAA CACATCCCAA CCCTCGCCGA GCGCTACCAC
GAAACGCTGG TCGCCACGCA CCTAGAACAC CCGCCTACCA GGGCCGAGTT GGCCGACATG
CGTACCTGGT ACAGGCAACT GGAATCGGAG CTGACCGACG CCGCCGTGCT CGGCGACACC
AGCTTTGTGG AAGACGCTGG CCAGGCGCAC CTGGCGGCCG AGGGCTTCAA TCCGGCGCTG
ACCGCGCCCG CCACGCTTCA CCTGTACTAC CAGCGCCTGC TGCACGCCGA CCTCGTCGCG
ATTAGGCAGC AGTTGCAGCA CTTGTCGGGC GCCCCCATCG AGAAGCCGAA GGTGCGTCCC
TCCCCGCTCG AAGGCGACAA CTGGGAGGCG ATGCTGGAGT GCTGGAAGGC TGAACGCGCG
CCGGGTGACA AGACGTGGGA TGAAGCCAAC CGGCTCGTGA ACAGGTTCCG GACGTTTTCG
AACGACCTCT CGCCTCTCGA CATCACGACG GAGCTCGTCG AGGCCTTTCG CGACAGCCTG
CTGCAGGAAG GCCTGTCCCG CCAGCGAGTC AAGACGATTC TGTCGCTGCT GCGTCCGGTG
GTGGGCACCG CTATCGAGAT GAAGCGGTGC AGCCTGACAG GCAACCCGTT CGCCGACGTG
AAAATCAATG TGCCCAAACG CGCGGCCGGC AAGGAACAGC GGCAACCGTT TGAACTCGAG
CACCTGCAGG CGCTCTTCCG TAGTCCGGTC TACACCGACG GGCTGCGCCC CAAGAAAGGG
GGCGGCGATG CAGCGTTCTG GCTGCCGCTG CTGGGTCTGT TTGGTGGACC GCGCGCCGAA
GAGCTCGGGC AGTTGCGCGT GACTGACGTG CTGCGTCGGG ATGGTCAGCT CTATCTGCGC
ATCTCGGAGC TGGGCGAGGA CCAGGAACTC AAAACGCTCG CCTCGGAGCG AATGGTGCCC
GTACATGAAG AACTGCTGCG TATCGGCTTC GAGAGCTATG TTGAAACCAT GCGTGAGCGC
GGTGAACAGC GCCTGTTCCC CGGACTCAAG GCTGACCGTT ACGGCAACTA CACCAAGATG
TTCTCGACCT GGTGCAACGA GTACATCGAT ACCTACGTCG TGGACGACAA GCGCTATGCA
TACCACTCGT TCCGGCATTG TTTCGAGGAA TTCGCCGGCT GGAGTGGTCT GACGCAGTAT
CAGATTGATG GGATTCTGGG CCATTCGCCG CAGGGCATGG CCAAGCTGTA TGGGAAGAAG
TCAGGCAGCC GTCGGACGTT CAATCCGAAG GTGCTGGCCG AGGGCATGGC GAAGTATCAC
GTCGAGGGCC TCGACCTGAG CCACCTGTAT GGCAGCTACT AG
 
Protein sequence
MQKQNYLVRR ESSAHYYFRR AVPPHLRASL GKREIVISLR TRDRRTAEVR ARQHAVSTDA 
EFLLHEQLVH NQGNAHPDET VGLSRPLEPQ HIPTLAERYH ETLVATHLEH PPTRAELADM
RTWYRQLESE LTDAAVLGDT SFVEDAGQAH LAAEGFNPAL TAPATLHLYY QRLLHADLVA
IRQQLQHLSG APIEKPKVRP SPLEGDNWEA MLECWKAERA PGDKTWDEAN RLVNRFRTFS
NDLSPLDITT ELVEAFRDSL LQEGLSRQRV KTILSLLRPV VGTAIEMKRC SLTGNPFADV
KINVPKRAAG KEQRQPFELE HLQALFRSPV YTDGLRPKKG GGDAAFWLPL LGLFGGPRAE
ELGQLRVTDV LRRDGQLYLR ISELGEDQEL KTLASERMVP VHEELLRIGF ESYVETMRER
GEQRLFPGLK ADRYGNYTKM FSTWCNEYID TYVVDDKRYA YHSFRHCFEE FAGWSGLTQY
QIDGILGHSP QGMAKLYGKK SGSRRTFNPK VLAEGMAKYH VEGLDLSHLY GSY