Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0438 |
Symbol | |
ID | 6288492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 467686 |
End bp | 469287 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642624002 |
Product | phage integrase |
Protein accession | YP_001898025 |
Protein GI | 187927538 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0285557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000000141533 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCAAAAAC AGAATTACCT CGTTCGCCGC GAGTCCAGCG CGCACTACTA TTTCCGACGC GCCGTCCCGC CACACCTGCG CGCCTCGCTC GGCAAGCGCG AAATCGTCAT CTCACTGCGC ACCCGCGACC GGCGCACCGC CGAAGTCCGC GCGCGACAGC ACGCCGTCAG TACCGATGCC GAATTCCTGC TGCACGAGCA ACTCGTGCAC AATCAGGGCA ACGCGCATCC CGACGAGACC GTCGGGCTTT CCCGGCCACT GGAACCTCAA CACATCCCAA CCCTCGCCGA GCGCTACCAC GAAACGCTGG TCGCCACGCA CCTAGAACAC CCGCCTACCA GGGCCGAGTT GGCCGACATG CGTACCTGGT ACAGGCAACT GGAATCGGAG CTGACCGACG CCGCCGTGCT CGGCGACACC AGCTTTGTGG AAGACGCTGG CCAGGCGCAC CTGGCGGCCG AGGGCTTCAA TCCGGCGCTG ACCGCGCCCG CCACGCTTCA CCTGTACTAC CAGCGCCTGC TGCACGCCGA CCTCGTCGCG ATTAGGCAGC AGTTGCAGCA CTTGTCGGGC GCCCCCATCG AGAAGCCGAA GGTGCGTCCC TCCCCGCTCG AAGGCGACAA CTGGGAGGCG ATGCTGGAGT GCTGGAAGGC TGAACGCGCG CCGGGTGACA AGACGTGGGA TGAAGCCAAC CGGCTCGTGA ACAGGTTCCG GACGTTTTCG AACGACCTCT CGCCTCTCGA CATCACGACG GAGCTCGTCG AGGCCTTTCG CGACAGCCTG CTGCAGGAAG GCCTGTCCCG CCAGCGAGTC AAGACGATTC TGTCGCTGCT GCGTCCGGTG GTGGGCACCG CTATCGAGAT GAAGCGGTGC AGCCTGACAG GCAACCCGTT CGCCGACGTG AAAATCAATG TGCCCAAACG CGCGGCCGGC AAGGAACAGC GGCAACCGTT TGAACTCGAG CACCTGCAGG CGCTCTTCCG TAGTCCGGTC TACACCGACG GGCTGCGCCC CAAGAAAGGG GGCGGCGATG CAGCGTTCTG GCTGCCGCTG CTGGGTCTGT TTGGTGGACC GCGCGCCGAA GAGCTCGGGC AGTTGCGCGT GACTGACGTG CTGCGTCGGG ATGGTCAGCT CTATCTGCGC ATCTCGGAGC TGGGCGAGGA CCAGGAACTC AAAACGCTCG CCTCGGAGCG AATGGTGCCC GTACATGAAG AACTGCTGCG TATCGGCTTC GAGAGCTATG TTGAAACCAT GCGTGAGCGC GGTGAACAGC GCCTGTTCCC CGGACTCAAG GCTGACCGTT ACGGCAACTA CACCAAGATG TTCTCGACCT GGTGCAACGA GTACATCGAT ACCTACGTCG TGGACGACAA GCGCTATGCA TACCACTCGT TCCGGCATTG TTTCGAGGAA TTCGCCGGCT GGAGTGGTCT GACGCAGTAT CAGATTGATG GGATTCTGGG CCATTCGCCG CAGGGCATGG CCAAGCTGTA TGGGAAGAAG TCAGGCAGCC GTCGGACGTT CAATCCGAAG GTGCTGGCCG AGGGCATGGC GAAGTATCAC GTCGAGGGCC TCGACCTGAG CCACCTGTAT GGCAGCTACT AG
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Protein sequence | MQKQNYLVRR ESSAHYYFRR AVPPHLRASL GKREIVISLR TRDRRTAEVR ARQHAVSTDA EFLLHEQLVH NQGNAHPDET VGLSRPLEPQ HIPTLAERYH ETLVATHLEH PPTRAELADM RTWYRQLESE LTDAAVLGDT SFVEDAGQAH LAAEGFNPAL TAPATLHLYY QRLLHADLVA IRQQLQHLSG APIEKPKVRP SPLEGDNWEA MLECWKAERA PGDKTWDEAN RLVNRFRTFS NDLSPLDITT ELVEAFRDSL LQEGLSRQRV KTILSLLRPV VGTAIEMKRC SLTGNPFADV KINVPKRAAG KEQRQPFELE HLQALFRSPV YTDGLRPKKG GGDAAFWLPL LGLFGGPRAE ELGQLRVTDV LRRDGQLYLR ISELGEDQEL KTLASERMVP VHEELLRIGF ESYVETMRER GEQRLFPGLK ADRYGNYTKM FSTWCNEYID TYVVDDKRYA YHSFRHCFEE FAGWSGLTQY QIDGILGHSP QGMAKLYGKK SGSRRTFNPK VLAEGMAKYH VEGLDLSHLY GSY
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