| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0420 |
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| Symbol | |
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| ID | 6289780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 449858 |
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| End bp | 451540 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642623986 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_001898009 |
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| Protein GI | 187927522 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.437867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000179935 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTTTT CCGAACTCGG CTTGTCAGAC AAGCTGGTAC GTGCCGTGGC CGAACTCGGC
TACGCAGAAC CTACTCCAAT TCAACGCCAG GCCATCCCCG CCATTCTCAG GGGAGGTGAC
CTGCTCGCCG GTGCTCAGAC CGGCACCGGC AAGACCGCCG GTTTCACGCT GCCGCTGCTG
CACCGCCTGT CTGCGGCGCA ACCTAACAAG GTGCAGACGC CGCAGGGCAT GCGCTTCCCG
ATCCGTGCGC TGGTGCTGAC GCCCACGCGT GAACTTGCCG CGCAAGTTGA AGAAAGCGTG
CGCGCCTATG GCAAATACCT GCCGCTGAAG TCCATGGTGA TGTTCGGCGG CGTCGGCATC
AACCCGCAGA TCGATGCGCT CAAGCGCGGT GTCGATATCG TCGTGGCCAC GCCGGGCCGC
CTGCTCGACC ACGTTGGCCA GCGCACCATC GACCTGTCGC ACATTGAATT GCTGGTGCTG
GACGAAGCCG ATCGTATGCT GGACATGGGC TTCATCCACG ACATCCGCAA GATCCTCAAC
ATCCTGCCGG CGAAGCGTCA GAACCTGCTG TTCTCGGCAA CGTTCTCCGA CGACATCCGC
GAACTGGCCG ACCGCCTGCT CGACAAGCCG GCGCTGATTG AAGTCGCGCG CCGCAACACG
ACGGCCGAGA CGGTCGAGCA GCGCATCTAC CCGGTCGACC GCGAGCGCAA GCGCGAACTG
CTTGCCAAGC TCGTGCGCGA CAACGACTGG CACCAGGTGC TGGTGTTCAC GCGCACCAAG
CACGGCGCGA ACCGCCTGGC CGAGCAGCTC ACGCGCGACG GCATTCCCGC TCTGGCCATC
CACGGCAACA AGAGCCAATC GGCGCGCACG CGTGCGCTGA CGGAATTCAA GGCTGGGACG
CTGCGCGTGC TGGTTGCCAC CGACATCGCC GCGCGCGGTA TCGACATCGA CCAACTGCCG
CACGTGGTCA ACTTCGACCT GCCGAACGTG CCGGAAGACT ACGTGCACCG TATCGGCCGC
ACGGGCCGCG CGGGTGCGCA GGGCGAGGCG ATCTCGCTGG TCTGCGTGGA CGAGCATGGT
TTGCTGCGCG ACATTGAACG CCTCATCAAG CGTGAGCTGC CGCGTACCGT GCTGGAACGT
TTCGAGCCCG ACCCGACCAT CGCGGCGGAG CCGATTCCGA ACGGGCGCAA CCCGGCGGGC
CGCGGCGGCA ACGCGCGCGG TGGCCGCCCG GGCGGTGGCC GCAGCCAGCA GCCTCGCCAG
GCCAGCGGCA ACGCTGCCCC GCGCGAGCCG CGGGCACCGC GTGAGCCTCG CGAACCGCGT
CGCGAGTCGA GCGGCAACGG TCAAGGGCAA GGGCAGGGGC AGAATCAAGG CCAGGGTCGC
AATGGTGGCG GCAGCCGCCA GCGCCAGGCG CAAGGCCAAC GCGACGGTCA AGCCGCGCCA
AAGCCGCGCA ACGGCCAATC GCAAGCGCGC GGCCAGCGCC AGGTCAATGG TCAAGGCCAG
GGCCAAGGCC AAGGCCAAGG CCAAGGCAAT GGACAAGGCG GGCAGGGCGG GCAGGGCGGT
CAACAACGCC GTGCATCGAA CACGCAAGCC GCGCAGCCGG CCCACAAGGG ACAGCCGGCC
AAGCAGCCGT TCAATGGTTT GTTCGCCAAG GCGGCTGCGT TGCTCGGCGG CCGTAAAGCC
TGA
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| Protein sequence | MSFSELGLSD KLVRAVAELG YAEPTPIQRQ AIPAILRGGD LLAGAQTGTG KTAGFTLPLL
HRLSAAQPNK VQTPQGMRFP IRALVLTPTR ELAAQVEESV RAYGKYLPLK SMVMFGGVGI
NPQIDALKRG VDIVVATPGR LLDHVGQRTI DLSHIELLVL DEADRMLDMG FIHDIRKILN
ILPAKRQNLL FSATFSDDIR ELADRLLDKP ALIEVARRNT TAETVEQRIY PVDRERKREL
LAKLVRDNDW HQVLVFTRTK HGANRLAEQL TRDGIPALAI HGNKSQSART RALTEFKAGT
LRVLVATDIA ARGIDIDQLP HVVNFDLPNV PEDYVHRIGR TGRAGAQGEA ISLVCVDEHG
LLRDIERLIK RELPRTVLER FEPDPTIAAE PIPNGRNPAG RGGNARGGRP GGGRSQQPRQ
ASGNAAPREP RAPREPREPR RESSGNGQGQ GQGQNQGQGR NGGGSRQRQA QGQRDGQAAP
KPRNGQSQAR GQRQVNGQGQ GQGQGQGQGN GQGGQGGQGG QQRRASNTQA AQPAHKGQPA
KQPFNGLFAK AAALLGGRKA
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