Gene Rpic_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0418 
Symbol 
ID6289778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp448066 
End bp449124 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content68% 
IMG OID642623985 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001898008 
Protein GI187927521 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.340149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000146207 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGACGTC CTGGAGCAGG AGACACCAAG GGCCGCATTC TGGAAGCCAC CGAACTGTTG 
TTCATCGAGT TCGGCTACGA GGCGATGTCG TTGCGGCAGA TCACGGCGCG CGCCAAAGTC
AATCTGGCGG CGGTCAACTA TCACTTCGGC AGCAAGGAAG CGTTGATGCA GTCGGTGCTT
GGGCGCCGGC TCGACCCGCT CAACACGCGC CGGCTGGCGC TGCTGACCGC GTGCGAAGAA
CGCTGGACCA AGGAGCAACT GACCTGCGAC CACGTGCTCG GCGCGCTGTT TGTGCCAGCG
CTGCAGATGG CGCGCAACCC CGACACCGGC GGCCCCGCAT TCCTGCGCCT GATGGGGCGC
GTGTATTCCG ACACCTCACC GTTCGTGCAG AGCTATCTGC TCGGCCACTA TGCGCTGGTG
TTCGATCGCT TCTTCGAAGC CTTCTCGCGT GCGCTGCCGC ACCTGCCGCG CGCTGAACTC
GGCTGGCGCC TGCACTTTGC GCTCAAGGCG CTCGCCGGCG TGCTGGCCGG AGACGACCTC
AATAACCTGC TGCCGCTGTT CACGCAGGGC AAGACGATGA ACGATGCCTC GCTGCTGGCA
CGCCTGACGG CGCTGGTGGT GGCTACGCTC AACGCCCCGC TGCCCGGCGA GGCCGGTGCG
CTCGATCAGG TGGTCGAGCT GGCCGAAGCG CAAGTTCCCA CGCCCGTCGC GCAAGCAGAT
GACGCCCCCA ACGGCAACGA CAGCGGCAAC GGCGGCTCAG GTCGCCACGC CGGGCGCGGC
AATGGCCGCG CCGAACGCAG CGCGACGCCC ACCACCGCCT CGCCCTTCGC CGGTGACCTG
TTCGGCCGCA CACCCGCGCG CGCCAGCGCC GACGATGCCG CGGACGCCCA CGACGATCTC
GGCGCCGGTG CGCACGACGA TACTCATGGT GACGACAGCG ACGTCGGCGG CCCCGCGCCC
ACCGCACGCA CCAGGGCATT GGCCATTCGC CGCAGCAATG CAGCACGCGC GATCTTCCCA
GCCAATCCGA TGCGCCCCTG GCGCAGCCCC AACGCCTGA
 
Protein sequence
MGRPGAGDTK GRILEATELL FIEFGYEAMS LRQITARAKV NLAAVNYHFG SKEALMQSVL 
GRRLDPLNTR RLALLTACEE RWTKEQLTCD HVLGALFVPA LQMARNPDTG GPAFLRLMGR
VYSDTSPFVQ SYLLGHYALV FDRFFEAFSR ALPHLPRAEL GWRLHFALKA LAGVLAGDDL
NNLLPLFTQG KTMNDASLLA RLTALVVATL NAPLPGEAGA LDQVVELAEA QVPTPVAQAD
DAPNGNDSGN GGSGRHAGRG NGRAERSATP TTASPFAGDL FGRTPARASA DDAADAHDDL
GAGAHDDTHG DDSDVGGPAP TARTRALAIR RSNAARAIFP ANPMRPWRSP NA