Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0418 |
Symbol | |
ID | 6289778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 448066 |
End bp | 449124 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642623985 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001898008 |
Protein GI | 187927521 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.340149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000146207 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGACGTC CTGGAGCAGG AGACACCAAG GGCCGCATTC TGGAAGCCAC CGAACTGTTG TTCATCGAGT TCGGCTACGA GGCGATGTCG TTGCGGCAGA TCACGGCGCG CGCCAAAGTC AATCTGGCGG CGGTCAACTA TCACTTCGGC AGCAAGGAAG CGTTGATGCA GTCGGTGCTT GGGCGCCGGC TCGACCCGCT CAACACGCGC CGGCTGGCGC TGCTGACCGC GTGCGAAGAA CGCTGGACCA AGGAGCAACT GACCTGCGAC CACGTGCTCG GCGCGCTGTT TGTGCCAGCG CTGCAGATGG CGCGCAACCC CGACACCGGC GGCCCCGCAT TCCTGCGCCT GATGGGGCGC GTGTATTCCG ACACCTCACC GTTCGTGCAG AGCTATCTGC TCGGCCACTA TGCGCTGGTG TTCGATCGCT TCTTCGAAGC CTTCTCGCGT GCGCTGCCGC ACCTGCCGCG CGCTGAACTC GGCTGGCGCC TGCACTTTGC GCTCAAGGCG CTCGCCGGCG TGCTGGCCGG AGACGACCTC AATAACCTGC TGCCGCTGTT CACGCAGGGC AAGACGATGA ACGATGCCTC GCTGCTGGCA CGCCTGACGG CGCTGGTGGT GGCTACGCTC AACGCCCCGC TGCCCGGCGA GGCCGGTGCG CTCGATCAGG TGGTCGAGCT GGCCGAAGCG CAAGTTCCCA CGCCCGTCGC GCAAGCAGAT GACGCCCCCA ACGGCAACGA CAGCGGCAAC GGCGGCTCAG GTCGCCACGC CGGGCGCGGC AATGGCCGCG CCGAACGCAG CGCGACGCCC ACCACCGCCT CGCCCTTCGC CGGTGACCTG TTCGGCCGCA CACCCGCGCG CGCCAGCGCC GACGATGCCG CGGACGCCCA CGACGATCTC GGCGCCGGTG CGCACGACGA TACTCATGGT GACGACAGCG ACGTCGGCGG CCCCGCGCCC ACCGCACGCA CCAGGGCATT GGCCATTCGC CGCAGCAATG CAGCACGCGC GATCTTCCCA GCCAATCCGA TGCGCCCCTG GCGCAGCCCC AACGCCTGA
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Protein sequence | MGRPGAGDTK GRILEATELL FIEFGYEAMS LRQITARAKV NLAAVNYHFG SKEALMQSVL GRRLDPLNTR RLALLTACEE RWTKEQLTCD HVLGALFVPA LQMARNPDTG GPAFLRLMGR VYSDTSPFVQ SYLLGHYALV FDRFFEAFSR ALPHLPRAEL GWRLHFALKA LAGVLAGDDL NNLLPLFTQG KTMNDASLLA RLTALVVATL NAPLPGEAGA LDQVVELAEA QVPTPVAQAD DAPNGNDSGN GGSGRHAGRG NGRAERSATP TTASPFAGDL FGRTPARASA DDAADAHDDL GAGAHDDTHG DDSDVGGPAP TARTRALAIR RSNAARAIFP ANPMRPWRSP NA
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