| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0413 |
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| Symbol | |
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| ID | 6289714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 439888 |
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| End bp | 441627 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642623980 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001898003 |
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| Protein GI | 187927516 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00496898 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACACCG TTGCCGACCG CAACAGCCTT ACCGACCGCA TCTGGCTGAA GTCGTACCCC
GAGGGCGTGC CCGCCGAAAT CAACCCCGAT CGCTATCACT CACTGGTCGA GGTGTTTCGC
GAATCGGTGG AAAAGTACCG CACCCGCATC GCCTACGTGA GTGTCGGCAC CGAAATGACG
TACGACGAGT GCGAACGACA AGCGAAGCAA TTTGCAGCGT GGCTGCAATC GCGCGGCGTG
AAGAAGGGCG ACCGCGTGGC GATCATGCTG CCCAACAGCC TGCAGTACCC CGTGTGCCTC
TTTGGCACGC TGCTGGCCGG CGCCATCGTC GTCAACGTCA ACCCGCTGTA CACGGTGCCG
GAACTGGCGC ACCAGTTGCG CGACTCCGGC GCGCAGACGA TTGTCGTGCT GGAGAACTTC
GCGCGCACGC TGGAGCAGGC TTTGCCCGGC AGCCAGGTGC GCAACATCGT CATCACCGGC
ATCGGCGACC TGATGGGCGG TGCGCTCAAC CTCAAGGGCC GCGCGCTGAA CTTCGTGATG
CGCCACGTGC AGAAGCAGGT GCCACCCTAC AAGCTGCCCT CGCCGGTCTG GCTGCGAGAT
GCGCTGGCCG TGGGCGGCTC GCGCACGATG CAACCGGTGC AACTGGCGCC GGAAGACATC
GCCTTCCTGC AATACACCGG CGGCACCACG GGCGTGGCCA AGGGCGCGAT GCTCACGCAC
CGCAACATCA TCGCCAACCT GCTGCAGGCA GAAGAGTGGT CCAAGAGCAT GCTCAACGGC
GGCGTGGAAA CCAACGTCAC GCTGCTGCCG CTGTATCACA TCTTCTCGCT CACGGTGAAC
CTGCTGATGT TCATGACGCT GGGCGGGCGC AATATCCTGA TCGCCAATCC GCGTGACACC
AAGCGCGTGA TCTTCATCCT GCGCAACGAA CGCTTCTCGG GCATTGCGGG GGTCAACACG
CTGTTCAACG CACTGCTGGA AGATCCGGAC TTCGCCACGC GCGACTTCTC GGCCATGAAG
ATCACCATCG GGGGCGGCAT GGCGGTGCAG CGTGCGATCG CGCAGCGCTG GAAAGAAGTC
ACGGGCCACA CCATCGTTGA AGGCTACGGG CTGACGGAAT GCTCGCCCGT CGTCTCGATG
AACCCGCCGC ACGTGACCGA ATTCAGCGGC ACGATCGGGC TGCCCGCGCC GTCCACCGAA
GTGCGTTTCA AGCGCGACGA CGGCACCATC GCGCCGCTGG GCGAACCCGG CGAACTGCAG
GTGCGTGGGC CGCAAGTCAT GCGCGGTTAC TGGCAGCGCC CGGAGGAAAC CGCCAAGTCC
ATCGACGCCG AAGGCTGGTT CTCCACCGGC GACATCGGGG TGATGGACGC CAACGGCTAC
ATCCGCCTGA TCGACCGCAA GAAGGACATG ATCCTGGTCT CGGGCTTCAA TGTGTACCCG
AACGAGATCG AAGACGTGGT GGCGCTGCAC CCCGACGTGC TGGAGGTGGC GGCCATTGGC
GTGCCCGATC CGGTGGCCGG CGAGCGCGTG AAGATCATCG TGGTGCCGCG CACTGGCGCC
CTGACCGAGC CCGCGCTGCT CGAACACTGC CGCGCCCATC TGACCGGCTA CAAGATGCCG
CGCATCGTTG AGTTCCGCCA CGAAGAGCTG CCCAAGTCGA CCGTGGGCAA GATCCTGCGC
CGCGAGCTGC GCGATGCCGA TCCGGACATC AAGCGCGCCC GTGCACAGGC GCAGCAATAA
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| Protein sequence | MNTVADRNSL TDRIWLKSYP EGVPAEINPD RYHSLVEVFR ESVEKYRTRI AYVSVGTEMT
YDECERQAKQ FAAWLQSRGV KKGDRVAIML PNSLQYPVCL FGTLLAGAIV VNVNPLYTVP
ELAHQLRDSG AQTIVVLENF ARTLEQALPG SQVRNIVITG IGDLMGGALN LKGRALNFVM
RHVQKQVPPY KLPSPVWLRD ALAVGGSRTM QPVQLAPEDI AFLQYTGGTT GVAKGAMLTH
RNIIANLLQA EEWSKSMLNG GVETNVTLLP LYHIFSLTVN LLMFMTLGGR NILIANPRDT
KRVIFILRNE RFSGIAGVNT LFNALLEDPD FATRDFSAMK ITIGGGMAVQ RAIAQRWKEV
TGHTIVEGYG LTECSPVVSM NPPHVTEFSG TIGLPAPSTE VRFKRDDGTI APLGEPGELQ
VRGPQVMRGY WQRPEETAKS IDAEGWFSTG DIGVMDANGY IRLIDRKKDM ILVSGFNVYP
NEIEDVVALH PDVLEVAAIG VPDPVAGERV KIIVVPRTGA LTEPALLEHC RAHLTGYKMP
RIVEFRHEEL PKSTVGKILR RELRDADPDI KRARAQAQQ
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