Gene Rpic_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0412 
Symbol 
ID6289713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp438950 
End bp439867 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content64% 
IMG OID642623979 
Productputative lipoprotein transmembrane 
Protein accessionYP_001898002 
Protein GI187927515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00679085 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTTGC GTACCCTCGC CCTGGCCACG GTGTTGGCCG GCGCCGCACA CGCCTGGGGC 
CAGCCTGCCG CGCCGGATGC TTCCGCGCCT GCCGCGGCCG CACAGACCGC CGCCCCGACC
GCCGCATCGC AATCGGCGGC CATCGGCAGC TTTGCCGCGA TGGATATCGC CAAGCAGACG
GCTTGGCTCG GCAGCCAGGT CAACGCCAAC GCGTTTGCGG GCTGGTCCGA CGAAGACGTC
CTGGCCATGG CGCATGCCAT GAAGCCCGAA ACGCTGGTGC GTTGGCTCAA GGCCGAAGTG
GCCAAGCTGC CTGAGTATGA ATACCGCATG CGCCGCCAGG AACGCGTGAA AGACCAGTGG
CAAAGCCAAG CGGCGCTCAT GCTCATCCGC TACCGCAACG CCCCGCGCCA GGTCTACGCG
CGCTGGCTCA GGGGCGGCGC GCACGCCGGC CAGGAAATCA TCTACGACGA AACCGTGCGC
AAGAACGAGA TGTATGGCCA CCTTGGCGGG CTCGTCGGCT TCGTGGCGAT CTGGAGTGCG
CTGGATGGCT CGCTGGCCAG ATCGCAGTCG AACCACACGG CGCGGGAGCT TGGGCTGCAG
TTCATCGTCG ATACGGTCGA GCGTGACGGA CGCGCCCACG TGGCAGCCGG CGGCAGCGGC
AAGTTCAACG AAGCCAAGAT GGTGACCGAA GACGGTGAAC GCATGCTGCG GCTGACCTGG
GATACGCCAA GCGGTCCGCC CACGTTCTAC GCCAAGCGCG TGCGCCTGTA TTTCGACCTC
AAAAACCCGT GGGTGCGCAT TGAAGAAGCG TGGGACGAAT CGGGCAATCA GCTCGAGAAA
ATCGTCATTG AAAGCGTGAC GCGCAAGACC TGGAACGACC AGACTTTCAA CCCCAAGAAT
CCGGAATACA AGTTTTAG
 
Protein sequence
MHLRTLALAT VLAGAAHAWG QPAAPDASAP AAAAQTAAPT AASQSAAIGS FAAMDIAKQT 
AWLGSQVNAN AFAGWSDEDV LAMAHAMKPE TLVRWLKAEV AKLPEYEYRM RRQERVKDQW
QSQAALMLIR YRNAPRQVYA RWLRGGAHAG QEIIYDETVR KNEMYGHLGG LVGFVAIWSA
LDGSLARSQS NHTARELGLQ FIVDTVERDG RAHVAAGGSG KFNEAKMVTE DGERMLRLTW
DTPSGPPTFY AKRVRLYFDL KNPWVRIEEA WDESGNQLEK IVIESVTRKT WNDQTFNPKN
PEYKF