Gene Rpic_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0407 
Symbol 
ID6289653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp433729 
End bp434721 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content65% 
IMG OID642623974 
ProductPhoH family protein 
Protein accessionYP_001897997 
Protein GI187927510 
COG category[T] Signal transduction mechanisms 
COG ID[COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0842646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA CCATCGCAGA ATTCACAGCG CCCAAGAACG ACAACACGCG CCTGCAGAAC 
CTGTGCGGGC CGCTGGACGA AAACCTGCGC CAGATCGAGC AGGCCCTGGA CGTGACCATC
AACCGGCGCG GTAGCAAGTT CACCGTGCGG GGCGCCAACG CACAAGGCGC GGCCAACGCG
CTGGAGACGT TCTACAACGC CGCACGCGAC CCGCTGTCGG TGGACGATAT CCAGCTTGGC
CTGGTGGAAA CCCGCCAGGT GGCTGCGCAT GGGGCTTACC TGCCGGAATC GGGCACCGAC
GAGCCGGACG GCAATGATCT ATCGCCGGTG CTGCATACGC GGCGCACCGA TCTGCATGGC
CGCACGCCGA TGCAGCGCGC GTACCTGCGC AACGTCCTCT CCCACGACCT GTCGTTCGGC
ATCGGACCGG CGGGTACGGG CAAGACGTAT CTGGCCGTCG CTTGCGCGGT GGATGCGCTT
GAGCGCGATG CCATCAAGCG CATCGTGCTG ACGCGTCCCG CCGTGGAAGC CGGCGAACGC
CTGGGCTTTC TGCCCGGCGA CCTCGCGCAA AAGGTGGACC CGTACCTGCG CCCCCTTTAC
GACGCGCTGT ACGACCTGCT CGGCTTCGAC AAGACCCAAA AGATGTTCGA GCGCCAGATG
ATCGAGATCG CACCGCTGGC GTACATGCGC GGGCGCACGC TCAATCACGC CTTCATCATC
CTGGACGAAG CCCAGAACAC CACCCCGGAA CAGATGAAGA TGTTCCTCAC GCGGATCGGC
TTCGGCTCCA AGGCGGTGAT CACCGGCGAC ACCACGCAGA TCGACCTGCC GCGCGGCCAG
AAGAGCGGCC TGATCGAAGC GCAGCACGTG CTGCGTGACG TGCGCGGCGT GGCGATGACG
CGCTTCACCA GCGTCGACGT GGTGCGGCAC CCGCTGGTGG CCCGCATCGT CGAGGCCTAT
GACGAATTCC ATGCCCAGCA TAAAGATGCA TAA
 
Protein sequence
MKPTIAEFTA PKNDNTRLQN LCGPLDENLR QIEQALDVTI NRRGSKFTVR GANAQGAANA 
LETFYNAARD PLSVDDIQLG LVETRQVAAH GAYLPESGTD EPDGNDLSPV LHTRRTDLHG
RTPMQRAYLR NVLSHDLSFG IGPAGTGKTY LAVACAVDAL ERDAIKRIVL TRPAVEAGER
LGFLPGDLAQ KVDPYLRPLY DALYDLLGFD KTQKMFERQM IEIAPLAYMR GRTLNHAFII
LDEAQNTTPE QMKMFLTRIG FGSKAVITGD TTQIDLPRGQ KSGLIEAQHV LRDVRGVAMT
RFTSVDVVRH PLVARIVEAY DEFHAQHKDA