Gene Rpic_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0402 
SymbolglyQ 
ID6287688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp427523 
End bp428509 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID642623969 
Productglycyl-tRNA synthetase subunit alpha 
Protein accessionYP_001897992 
Protein GI187927505 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0752] Glycyl-tRNA synthetase, alpha subunit 
TIGRFAM ID[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.41334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACCT TCCAGCAACT CATTCTCAAG CTGCAGTCGT ACTGGGACGC CCAGGGCTGC 
GCCCTGCTGC AACCGATCGA CCTCGAAGTC GGCGCGGGCA CGTCGCACGT GCACACCTTC
CTGCGCGCGA TCGGCCCGGA GCCGTGGCGT GCCGCCTACG TGCAACCGTC GCGCCGCCCC
AAGGACGGCC GCTACGGCGA GAATCCGAAC CGCCTGCAGC ACTACTACCA ATATCAGGTG
GTGTTGAAGC CCGCGCCGGA AAACATCCTC GACCTGTACC TCGGTTCGCT GGAAGCGCTG
GGCCTGGACC TCAAGCAGAA CGATGTGCGC TTCGTCGAAG ACGACTGGGA AAACCCCACG
CTCGGCGCCT GGGGCCTCGG CTGGGAGGTG TGGCTCAACG GCATGGAAGT CACGCAGTTC
ACGTACTTCC AGCAAGTTGG CGGCCTGGAC TGCAAGCCCG TGACCGGTGA GATCACCTAC
GGCATCGAGC GCCTGGCGAT GTACCTGCAG CAGGTCGAGA ACATCTACGA CCTGGTCTGG
ACGGAGTGGG AAGAGCCGGG CCCGAACGGC CCCGTGAAGC GCCGCTTGAC CTACGGCGAC
GTCTATCACC AGAACGAGGT CGAGCAATCG ACCTACAACT TCGAACAGGC CGACACGACG
GTGCTGTTCC GCCGCTTTGC GGAGCACGAA GCCGAAGCCA AGCGCCTGAT GGGCGTACGC
GCAGAAGGCG ATGCCGCTGC CGAGGGCGAC GCACCTGTCG TGCAACTGGC CCTGCCCGCC
TACGAGCAAG TGCTCAAGGC CGGCCACACC TTCAACCTGC TGGACGCACG CGGCGCCATT
TCGGTGACGG AGCGCGCGGC CTACATCGGC CGCATCCGCA ATTTGTCGCG CCTGGTCGCG
CAGGCTTACT ACGATTCGCG CGAGCGCCTG GGCTTCCCGA TGTGCGGCAC GGCCGCTGCC
GCTGTCAAGA CCACGGAGGC CGCATGA
 
Protein sequence
MLTFQQLILK LQSYWDAQGC ALLQPIDLEV GAGTSHVHTF LRAIGPEPWR AAYVQPSRRP 
KDGRYGENPN RLQHYYQYQV VLKPAPENIL DLYLGSLEAL GLDLKQNDVR FVEDDWENPT
LGAWGLGWEV WLNGMEVTQF TYFQQVGGLD CKPVTGEITY GIERLAMYLQ QVENIYDLVW
TEWEEPGPNG PVKRRLTYGD VYHQNEVEQS TYNFEQADTT VLFRRFAEHE AEAKRLMGVR
AEGDAAAEGD APVVQLALPA YEQVLKAGHT FNLLDARGAI SVTERAAYIG RIRNLSRLVA
QAYYDSRERL GFPMCGTAAA AVKTTEAA