Gene Rpic_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0399 
Symbol 
ID6288502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp424077 
End bp424655 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID642623966 
ProductD,D-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_001897989 
Protein GI187927502 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.271621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.872547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACG TTCCCAAACT GGTGATTCTC GACCGCGATG GCGTCATCAA CCGAGACAGC 
GACCAGTTCA TCAAGTCGCC CGACGAGTGG ATCGCGCTCG AGGGCAGCCT GGAAGCCATT
GCCGAACTTA ACCAGGCGGG CTACCAGGTG GTGGTGGCAA CCAACCAGTC GGGCATCGGA
CGCGGCCTGT TTGAGGCCGC CGCGCTCAAC GCCATGCACG AGAAGATGTA CAAGGCGCTC
GCCACCTACG GCGGGCGCGT CGATGCCGTC TTCTTCTGCC CGCACACCGC CGCCGATGCC
TGCGAATGCC GCAAGCCCAA GTCCGGCATG CTGCGCGAGA TTGCACGCCG CTTCGACGTG
GACCTCACGG GCGTGCCGGT CGTGGGAGAC TCGCTGCGCG ATCTGCAAGC CGGCGTCGAA
GTCGGCGCCG TACCGCACCT CGTACTGACC GGCAAGGGCA CCAAGACCCG CGATGCCGGC
GACCTGCCCC CGGGCACCCA AATTCACGAG GACCTGCGTG CGTTTGCGCG TGCGCTGCTG
TCCCCCGCGC CCCAGGGCAC GCCCACGCGC GCCCCTTGA
 
Protein sequence
MPHVPKLVIL DRDGVINRDS DQFIKSPDEW IALEGSLEAI AELNQAGYQV VVATNQSGIG 
RGLFEAAALN AMHEKMYKAL ATYGGRVDAV FFCPHTAADA CECRKPKSGM LREIARRFDV
DLTGVPVVGD SLRDLQAGVE VGAVPHLVLT GKGTKTRDAG DLPPGTQIHE DLRAFARALL
SPAPQGTPTR AP