| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0394 |
|---|
| Symbol | ksgA |
|---|
| ID | 6287804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 420190 |
|---|
| End bp | 421035 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642623961 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_001897984 |
|---|
| Protein GI | 187927497 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGAT CCACGACCGG CGTTCACCAA GGGCACCAGG CCCGCAAGCG CTTCGGCCAG
AACTTCCTGG TCGATGACGG CGTGATCCAC GCCATCGTTG CCGCCATCGA TCCGAAGCCC
GACGATGTAC TTGTCGAGAT CGGCCCCGGC CTGGGCGCGC TCACGGTGCC GCTGATGGAG
CGCGTGCGCA CGCTGCAGGT GGTCGAGCTG GATCGAGACC TTGTCGCGCG CTTGCAGCAG
CGATTCGGTG ATCGGCTGAT CGTGCATGCG GGCGATGCAC TGGCGTTCGA TTTCGGTTCG
CTGCAGGAGG CGGGCCGGCC GCTGCGCATC GTCGGCAACC TGCCGTACAA CATCTCGAGC
CCGCTGCTGT TTCATCTGGC CACGTTCGCC GATCGTGTGC GCGATCAGCA TTTCATGCTG
CAGAAAGAAG TGGTCGACCG CATGGTCGCC GCGCCGGGTA GCAAGGCGTT CAGCCGGCTG
TCGGTGATGC TGCAGGTGCG GTACTACATG GAGCTGGTGC TGGATGTGCC GCCGGGCTCG
TTCAACCCGC CGCCCAAAGT GGATTCGGCG GTGGTGCGGA TGATTCCGTG GCCGGCCGAC
AAATCGCCGT ATGCGCCGGT CGACCTGCGC GCGCTTGGCA CGGTGGTGAC GATGGCGTTT
TCGCAGCGCC GCAAGGTGTT GCGCAACACG CTGGGCGCGC TGCGCGATGT GATCGATTTC
GAAGCGCTTG GCTTTGACCT GGGCCGGCGC GCAGAAGAAG TGTCGGTGGA AGACTTCGTG
GCAGTGGCGA ACGCACTGCC GGCCAATCGC ATTGCCGGCA GCGCCTCCGA CCTTAGCGAA
GATTGA
|
|---|
| Protein sequence | MARSTTGVHQ GHQARKRFGQ NFLVDDGVIH AIVAAIDPKP DDVLVEIGPG LGALTVPLME
RVRTLQVVEL DRDLVARLQQ RFGDRLIVHA GDALAFDFGS LQEAGRPLRI VGNLPYNISS
PLLFHLATFA DRVRDQHFML QKEVVDRMVA APGSKAFSRL SVMLQVRYYM ELVLDVPPGS
FNPPPKVDSA VVRMIPWPAD KSPYAPVDLR ALGTVVTMAF SQRRKVLRNT LGALRDVIDF
EALGFDLGRR AEEVSVEDFV AVANALPANR IAGSASDLSE D
|
|---|
| |