Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0391 |
Symbol | |
ID | 6287781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 415116 |
End bp | 417557 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623958 |
Product | Organic solvent tolerance protein |
Protein accession | YP_001897981 |
Protein GI | 187927494 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.298665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC CGAACCGAGC CAGGAAGAAC CGGCAGCGCG CTGCTGTCGC CGCGCCCGAT CAGCGGCCCG CCGACTTGGC CACCATCAGG CGTGGCACGC TGGCATTGCG CCCGCTGGTA TTTGCGGTGG CCGGTGTCTG GACGGCGACG TCCGCGGCGC AGAGCACGGG CACAACGCAA GCGACGGCGC CCGCTGTCAC TCCGGCCTCG TCGGTGACCG CGCTGGCGAC GTCCGGACCG ACCACGCCCG GCGGCAGTCC GCTGGTGCCC AAGATGGCCG AGCCCGTCCA GCGACCGGAC AACACTGTCC CCACGTTTAC CGCGGCCGAC AAGATGGACG GTCGCACCAA CGAAGACATC CACCTGCGCG GTAATGGCGA ACTGCGCCGC AACGGCTCGG TGCTGAAGGG CGACACGCTC GATTACAACC AGGACACCGA CGTCGCAACC GCAACCGGCA ACGTGCGCCT GTTCAAGGGC GGCACGCTGG TCACCGGCCC GGACGCCAAG CTGAAGATTA CCGCCAACGA AGGGACCATC AGCACGCCGA GCTACGAGTT CCACTCGAAC GGCGGCCACG GCACTGCAGA CCGCATCGAC TTCGTCGACA AGGACAACAG CCGCATCACG CGCGGCACGT ACACCACGTG CTCGCCCGAC AACGTCGACT GGTACTTCAG CGCCAGCCGC ATCGACATCG ACAGCGACCG CCAGGTCGGC ACGGGCCGCA ACGGCGTGCT GCACTTCTTC GGCGTGCCGG TGTTTGCGGC GCCGGTCATG GATTTTCCGC TCAATGACGA TCGGCGCAGC GGTTTCCTGG CACCGGTGTT CGGCTACAAC AGCCGCAGCG GGGCCGACGT CACGCTGCCG TACTACTTCA ACATCGCGCC GAATCGCGAT CTGACGTTGT ATCCGCGTCT GCTGAGCCAG CGCGGCTTGC AGCTCGGCGC GGAATACCGC TATCTCGATA CATCGTACAG CGGCGTTCTG CGTGGCGAAT TCCTGCCCGA TGATCGTGAG GCAGGCCGCA ACCGCTGGTC GATTTCGGCA GTACACACAC AGCGCCTGGC GCCGGGCCTG ACCGGCTACA TCAACTACAA CAAGGTTTCC GATAACACCT ACCCGGATGA CCTCGGCCGC AGCATTGTCA CGGCGACGCA GCGGCAGTAC ATCCAGGAGG GCGGTGTTAG TTACTCGTTC GGCGACTGGG TTGCGCTGGC GCGCGTGCAG AAGTTCCAGA CGCTGTCGAC CGCCACAACG CCACTCGCAG CACCGTATGA GCGACTGCCG CAGTTGAGCC TGACCTATAA CAAGTACGAC GTTGGCGGCT TTGACATCAA TTTCCTGACC GACTACACGC GGTTTTCGAT CCCGACGGCC AATACCGTGC AGGGCGAGCG CCTGTTCATG CAGCCGACGA TCAGCTACCC GATCGTCCGC CCCGGCTGGT ACGTCACCCC GAAGTTCATC CTGAACACCA CCGCATACCG CCTGGACCGC CCGGCCGGCG ACACGCAGGA CACGCAGATC AATCGCACGC TTCCGACGTT CTCGCTCGAT TCGGGCATGA CCTTCGAGCG CGATGCGCCG CTGGTCTCCA AATTGTTCGG CGTGAGCTAC ATCCAGACGC TGGAGCCGCG CGTGTTCTAC GTGTACACGC CGTATCGCGA CCAGTCGCAG ATTCCGTTGT TCGATACCGG CCAGTCGGAC TACAACCTCG GGCAGATATT TACCGAGAAC CCGTACACCG GTTACGACCG CATTGCCGAC AACAACAAGG TGACGGCAGG TGTGACCACG CGTTTCATCG AGGCCGAATC AGGCATCGAG CGCCTGCGTG CCACGATTGC GCAGCGCGTC GATCTCGACG GGCAGCGCGT GACGCTGGCG GGTGCGGCCC CGACGTCGGT ACGCCGCTAT TCGGACCTTC TGGGTGCGAC CACGATCCAG ATGTTCCGCG GCATCTTTTT CGATACGAAC CTTCAGTACA ATCAGGACCT CGACCGCATC ATGCGTTCGA CGGTCGCGTT CAGCTGGAAG CCGGAAGCCA ACAAGGTGAT CAACCTCGGC TACCGCTATT ACCGGCAAGA CGCCAATACC GGTCAGTTGC CGCTGGAACA GGCCGATATC TCCACGCAGT GGCCGATTAC GCGGCGCCTC TACGGCCTGG GTCGCATCGG TTACGACCTG GATGCGCGCA AGCCATCGGA TGTGCTGCTC GGCCTCGAAT ATGTGGCGGA CTGCTGGGTC GGCCGACTGG CGGTACAGCG CTACAGCAAT GCGGTTTCGG GCTATACGAC GCATATCTTT GCCCAGATCG AATTCAAGGG TTTGTCGAAG GTGGGGAACA ATCCGATCGA CGTGATTCGT CTGAACGTGC CCGGCTACCA GCCGGTGAAC GCACAGCCGA TCACGCCGTC CGTGCTGGAT CAATATGAAT AA
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Protein sequence | MTEPNRARKN RQRAAVAAPD QRPADLATIR RGTLALRPLV FAVAGVWTAT SAAQSTGTTQ ATAPAVTPAS SVTALATSGP TTPGGSPLVP KMAEPVQRPD NTVPTFTAAD KMDGRTNEDI HLRGNGELRR NGSVLKGDTL DYNQDTDVAT ATGNVRLFKG GTLVTGPDAK LKITANEGTI STPSYEFHSN GGHGTADRID FVDKDNSRIT RGTYTTCSPD NVDWYFSASR IDIDSDRQVG TGRNGVLHFF GVPVFAAPVM DFPLNDDRRS GFLAPVFGYN SRSGADVTLP YYFNIAPNRD LTLYPRLLSQ RGLQLGAEYR YLDTSYSGVL RGEFLPDDRE AGRNRWSISA VHTQRLAPGL TGYINYNKVS DNTYPDDLGR SIVTATQRQY IQEGGVSYSF GDWVALARVQ KFQTLSTATT PLAAPYERLP QLSLTYNKYD VGGFDINFLT DYTRFSIPTA NTVQGERLFM QPTISYPIVR PGWYVTPKFI LNTTAYRLDR PAGDTQDTQI NRTLPTFSLD SGMTFERDAP LVSKLFGVSY IQTLEPRVFY VYTPYRDQSQ IPLFDTGQSD YNLGQIFTEN PYTGYDRIAD NNKVTAGVTT RFIEAESGIE RLRATIAQRV DLDGQRVTLA GAAPTSVRRY SDLLGATTIQ MFRGIFFDTN LQYNQDLDRI MRSTVAFSWK PEANKVINLG YRYYRQDANT GQLPLEQADI STQWPITRRL YGLGRIGYDL DARKPSDVLL GLEYVADCWV GRLAVQRYSN AVSGYTTHIF AQIEFKGLSK VGNNPIDVIR LNVPGYQPVN AQPITPSVLD QYE
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