Gene Rpic_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0385 
Symbol 
ID6288816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp408437 
End bp409816 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content68% 
IMG OID642623952 
Productpeptidase M24 
Protein accessionYP_001897975 
Protein GI187927488 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA CCGAACTCGC TTTCCTCCAG ACCTATCGCC AGCGCCGCGA GCGCATCGTG 
CAGTGGCTGC GCGCGGCGGG TGGCGGGGTC GCCATCGTGC CGACCGCGCC CGAGGCGATG
CGCAACCGCG ACAGCGATTA TCCCTACCGG CACGACAGCT ACTTCTATTA CCTGACCGGC
TTCACCGAGC CCGAAGCGGT ACTCGCCATC GTGGTACCCG CAGGCAGCGC ACCGGCGCGC
AGCGTGCTGT TCTGCCGCCC GAAGCACGAA GAGCGTGAAA TCTGGGACGG CTTCCGCTTC
GGCCCCGAAG CAGCGAAGGA CGCCTTCGGC CTGGATGAGG CGCACTCGGT GGAAGAGATC
GATGCGACGT TGCCAAAGCT GCTCGCCAAC GCCGCCGCCG TGGCATGTCC GCTGGCCGAG
AGCAGCGCGT TCGACCGCCG CATGCGCCGC TGGCTCGATG CAGTGCGCAT GCAAGGCCGC
GCGGGGGTGT CGTCGCCGCA CCAGGCGCTG GACGTGCGCG CCATCCTCGA TGAGATGCGG
CTGTTCAAGG ACGCAAGCGA ACTCGACATC ATGCGCCGTG CCGGACGCAT TTCCGCCGGA
GCGCACGTGC GCGCCATGCA GGCGTCGCGT GCCGGGCTGC GTGAATACCA TCTCGAAGCG
GAGCTGCTAT ATGAATTCCG CCGCCACGGT GCGCAAAGCG TTGCCTATAA CTCCATCGTG
GCGACGGGCC CGAACGCGTG CGTACTGCAC TACCGCGCCG GCAACGCAGA ACTGCGCGAC
GGCGATCTCT GCCTGATCGA TGCCGGCTGT GAGCTGGATG GCTACGCGTC AGACATCACC
CGCACGTTCC CGGTCAATGG CCGCTTCACC GGCCCGCAAC GCGAGCTGTA TGCGCTGGTG
GTGGCCGCGC AGGAAGCCGC CCTTGCCGAG ACGCGCCCCG GCGTGCCTTA CAACGTGCCG
CACGATGCCG CCACGCGCGT GCTGGCGCAA GGCATGCTCG ACACCGGCCT GCTCGACGCC
GACAAGGTCG GCACGCTCGA CGACGTGATC GCCGGCGGCC AATACCGCCA GTTCTACATG
CACCGCACCG GCCATTGGCT CGGCATGGAC GTGCACGATG TGGGCGAATA CCGCACGCCC
GGCACCGCTG CTCCGGCTGA AGGCGAACGC CCGTGGCGCC CGCTGGAAGC CGGCATGGTG
CTGACCGTCG AACCCGGCAT CTACGTGCGC CCCGCGCCCG GCGTGCCGGA ACAGTACTGG
CACATCGGCA TCCGCATTGA AGACGACGCC ATCGTCACGC CCGAAGGCTG CGAAATCATC
ACGCGCGACG TGCCCGTAGC CCCGGACGAA ATCGAACTGG TGATGCGGGG CCAGGCATGA
 
Protein sequence
MSATELAFLQ TYRQRRERIV QWLRAAGGGV AIVPTAPEAM RNRDSDYPYR HDSYFYYLTG 
FTEPEAVLAI VVPAGSAPAR SVLFCRPKHE EREIWDGFRF GPEAAKDAFG LDEAHSVEEI
DATLPKLLAN AAAVACPLAE SSAFDRRMRR WLDAVRMQGR AGVSSPHQAL DVRAILDEMR
LFKDASELDI MRRAGRISAG AHVRAMQASR AGLREYHLEA ELLYEFRRHG AQSVAYNSIV
ATGPNACVLH YRAGNAELRD GDLCLIDAGC ELDGYASDIT RTFPVNGRFT GPQRELYALV
VAAQEAALAE TRPGVPYNVP HDAATRVLAQ GMLDTGLLDA DKVGTLDDVI AGGQYRQFYM
HRTGHWLGMD VHDVGEYRTP GTAAPAEGER PWRPLEAGMV LTVEPGIYVR PAPGVPEQYW
HIGIRIEDDA IVTPEGCEII TRDVPVAPDE IELVMRGQA