Gene Rpic_0375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0375 
Symbol 
ID6289421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp398355 
End bp399071 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content62% 
IMG OID642623942 
Producthypothetical protein 
Protein accessionYP_001897965 
Protein GI187927478 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCG CCCCGCACCA CCCGAACCGC ACGTTCCGAT ACTACGACTT CATCATGGCG 
GCCTTCGTCA CAGTGCTGCT GTGCTCGAAC CTGATCGGCG CGTCCAAGGC GGCGCAGGTC
ACGTTGCCGG TGCTCGGATC GGTCACCTTC GGCGCTGGCG TGCTGTTCTT TCCAATTTCC
TACATCTTCG GCGACATCCT CACCGAGGTG TACGGTTACG GGCGTGATCG GCGCGTGGTG
TGGGCGGGCT TTGCCGCACT GATCTTTGCG TCGTTCATGT CGCTGGTCGT GCTGGCGCTA
CCGGTGGCGC CCTTCATGGC CGGTTATCAG AGGAGCCTGA ACGACGTGTT CGGCAACACG
CCGCGCATCG TCGCCGGGTC GCTCATTGCG TTCTGGTGTG GCAGCTTCGC CAACAGCTAC
ACGCTGGCGA AGATGAAGAT CGCGACGGAA GGAAAATGGC TGTGGACGCG CATCGTCGGA
TCCACCGTGG TGGGCGAGGC GGTCGATTCG TCGCTGTTCT ACGTGATCGC CTTCTACGGC
ATCTGGCCCC ACGAACAGGT GCTGCGTGTC GCCATTGCGC AATACATCCT CAAGACTGGC
TGGGAAATCG TCGCAACGCC GCTCACCTAC CGCGTCGTCG CCTTCCTCAA GCGCGCCGAG
AACGAGGATT ACTACGACCG CGACACCAAC TTCACGCCGT TCCGGCTGAA GGTTTAA
 
Protein sequence
MSAAPHHPNR TFRYYDFIMA AFVTVLLCSN LIGASKAAQV TLPVLGSVTF GAGVLFFPIS 
YIFGDILTEV YGYGRDRRVV WAGFAALIFA SFMSLVVLAL PVAPFMAGYQ RSLNDVFGNT
PRIVAGSLIA FWCGSFANSY TLAKMKIATE GKWLWTRIVG STVVGEAVDS SLFYVIAFYG
IWPHEQVLRV AIAQYILKTG WEIVATPLTY RVVAFLKRAE NEDYYDRDTN FTPFRLKV