Gene Rpic_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0360 
Symbol 
ID6287680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp385126 
End bp385860 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content61% 
IMG OID642623927 
ProductABC transporter related 
Protein accessionYP_001897950 
Protein GI187927463 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.515696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TCAAGAACGT TTCCAAGTGG TACGGCAGCT TCCAGGTGCT GACCGACTGC 
ACCACCAGCG TGAAGAAGAG CGAGGTGGTG GTGGTGTGCG GCCCGTCGGG TTCCGGCAAG
TCCACGCTGA TCAAGACCGT CAACGCGCTG GAGCCGTTCC AGAAGGGCGA AATCTTCGTC
GACGGCACTT CGGTCGGCGC CAAGGGCACC AACCTGCCGA AGCTGCGTTC GCGCGTGGGC
ATGGTGTTCC AGAACTTCGA GCTGTTTCCG CACCTCTCGA TTACCGAGAA CCTGACGATT
GCACAGCAGA AGGTGCTGGG CCGCTCGAAA GAAGAGGCCA TGGCCAAGGG CCTGAAGTAT
CTGGATCGCG TGGGTCTGAA GGCGCACGCT GCCAAGTACC CGGGCCAGCT GTCGGGCGGT
CAGCAGCAGC GGGTGGCAAT CGCCCGTGCG CTGTCGATGG ACCCGATCTG CATGCTGTTC
GACGAGCCGA CCTCCGCGCT GGACCCGGAA ATGGTCAATG AAGTGCTCGA CGTGATGGTG
GAGCTGGCCA AGGAAGGCAT GACCATGATG TGCGTGACCC ACGAAATGGG CTTCGCTCGC
AAGGTCGCCA ATCGCGTGAT CTTCATGGAC CAGGGCCGCA TCGTTGAAGA CTGCGAGAAG
GAAGAGTTCT TCGGCAACAT CGACGCGCGT TCCGATCGCG CCAAGCAGTT CCTGTCGAAG
ATCCTGTCGC ACTGA
 
Protein sequence
MIEIKNVSKW YGSFQVLTDC TTSVKKSEVV VVCGPSGSGK STLIKTVNAL EPFQKGEIFV 
DGTSVGAKGT NLPKLRSRVG MVFQNFELFP HLSITENLTI AQQKVLGRSK EEAMAKGLKY
LDRVGLKAHA AKYPGQLSGG QQQRVAIARA LSMDPICMLF DEPTSALDPE MVNEVLDVMV
ELAKEGMTMM CVTHEMGFAR KVANRVIFMD QGRIVEDCEK EEFFGNIDAR SDRAKQFLSK
ILSH