Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0360 |
Symbol | |
ID | 6287680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 385126 |
End bp | 385860 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642623927 |
Product | ABC transporter related |
Protein accession | YP_001897950 |
Protein GI | 187927463 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.515696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA TCAAGAACGT TTCCAAGTGG TACGGCAGCT TCCAGGTGCT GACCGACTGC ACCACCAGCG TGAAGAAGAG CGAGGTGGTG GTGGTGTGCG GCCCGTCGGG TTCCGGCAAG TCCACGCTGA TCAAGACCGT CAACGCGCTG GAGCCGTTCC AGAAGGGCGA AATCTTCGTC GACGGCACTT CGGTCGGCGC CAAGGGCACC AACCTGCCGA AGCTGCGTTC GCGCGTGGGC ATGGTGTTCC AGAACTTCGA GCTGTTTCCG CACCTCTCGA TTACCGAGAA CCTGACGATT GCACAGCAGA AGGTGCTGGG CCGCTCGAAA GAAGAGGCCA TGGCCAAGGG CCTGAAGTAT CTGGATCGCG TGGGTCTGAA GGCGCACGCT GCCAAGTACC CGGGCCAGCT GTCGGGCGGT CAGCAGCAGC GGGTGGCAAT CGCCCGTGCG CTGTCGATGG ACCCGATCTG CATGCTGTTC GACGAGCCGA CCTCCGCGCT GGACCCGGAA ATGGTCAATG AAGTGCTCGA CGTGATGGTG GAGCTGGCCA AGGAAGGCAT GACCATGATG TGCGTGACCC ACGAAATGGG CTTCGCTCGC AAGGTCGCCA ATCGCGTGAT CTTCATGGAC CAGGGCCGCA TCGTTGAAGA CTGCGAGAAG GAAGAGTTCT TCGGCAACAT CGACGCGCGT TCCGATCGCG CCAAGCAGTT CCTGTCGAAG ATCCTGTCGC ACTGA
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Protein sequence | MIEIKNVSKW YGSFQVLTDC TTSVKKSEVV VVCGPSGSGK STLIKTVNAL EPFQKGEIFV DGTSVGAKGT NLPKLRSRVG MVFQNFELFP HLSITENLTI AQQKVLGRSK EEAMAKGLKY LDRVGLKAHA AKYPGQLSGG QQQRVAIARA LSMDPICMLF DEPTSALDPE MVNEVLDVMV ELAKEGMTMM CVTHEMGFAR KVANRVIFMD QGRIVEDCEK EEFFGNIDAR SDRAKQFLSK ILSH
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