Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0359 |
Symbol | |
ID | 6287016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 384446 |
End bp | 385129 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642623926 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001897949 |
Protein GI | 187927462 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.185979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTATC AATTCGATTT CTCGTCCATC AACGTCGACA ACATGCGCGT GCTCGGCGAG GGCATGCTCC TTTCGCTCGA GATCACAGGC ACGGCCATCC TGGTCGGCAT CGTGTGGGGC ACGCTGCTGG CGATGATGCG CCTGTCGGGC ATCAAGCCGC TGCAGGTGTT CGGGCAGGCG TACGTGAACC TCTTCCGGTC CATCCCGCTG GTGATGGTGC TGCTGTGGTT CTTCCTGATC GTGCCGCAGG TACTGCAGAA AATCTTCAAC CTGTCGCCGG CCACCGACAT GCGCATGACG TCCGCGCTGG TCGCCTTCGC GCTGTTTGAA GCGGCGTATT ACTCGGAGAT CATCCGCGCC GGTATCCAGA GCGTCTCGCG CGGGCAGATG TTCGCCGCCT ACGCGATGGG TATGACGTAC GGCCAGGCCA TGCGCCTGGT GATCCTGCCG CAGGCATTCC GCAACATGAT TCCGTTGCTG CTCACCCAGG CCATCGTCCT GTTCCAGGAT ACGTCGCTGG TGTATGTGAG CGCGCTGTCG GACTTCTTTA CGCAGGCATA CAACATCGGT GAGCGCGACG GCCGTATCGT CGAGCTGCTG CTGTTTGCCG GCTTGTGCTA TTTCGTGATC TGCTTCGGCG CCTCCGTGCT GGTGAAGCGA CTTCAGAAGA AGGTGACCCA ATGA
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Protein sequence | MAYQFDFSSI NVDNMRVLGE GMLLSLEITG TAILVGIVWG TLLAMMRLSG IKPLQVFGQA YVNLFRSIPL VMVLLWFFLI VPQVLQKIFN LSPATDMRMT SALVAFALFE AAYYSEIIRA GIQSVSRGQM FAAYAMGMTY GQAMRLVILP QAFRNMIPLL LTQAIVLFQD TSLVYVSALS DFFTQAYNIG ERDGRIVELL LFAGLCYFVI CFGASVLVKR LQKKVTQ
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