Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0357 |
Symbol | |
ID | 6287014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 382692 |
End bp | 383600 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642623924 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_001897947 |
Protein GI | 187927460 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.305977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTCG CCAAGCTGGC AACCGTGGTT GCTGCCGTTG GTGTCGCCGT TGGTGCGTTC GGCAGCGCTG CCCACGCAGA AGAGCTGACT GGTACGCTCA AGAAGATCAA AGACACCGGC ACCATCACGC TGGGCGTGCG CGATTCGTCG ATTCCGTTCA GCTACAACGT CGGCGGTGTC CGCACGATCG GCTATTCGTA CGACGTCGCC ACCAAGATTG CCGAGGACGT GAAGAAGCAG CTCGGCCTGA AGGACCTGAA GGTCAACGAG ATCCCGGTCA CTTCGCAGAA CCGCATCACG CTGCTGCAGA ACGGCACCAT CGATCTGGAG TGCGGTTCGA CCACGAACAA CCTCGAGCGT CAGAAGCAGG CATCGTTCAC GAACACCATC TTCATCATCG GCACGCGCAT CATGGTGAAG AAGGATTCGG GCGTCAAAGA TTGGGCAGAC CTGAAGGGCA AGAACGTCGT GACCACCGCC GGTACGACTT CGGAACGCCT GCTGCGCAAG ATGAACGATG AGAAGCAGAT GGGCATGAAC ATCATCAGCA CGAAGGACCA CGGCCAGTCG TTCCTGACGC TGGAATCGGG CCGCGCTGTT GCGTTCATGA TGGACGACGC CCTGCTGTAC GGCGAGCGCG CCAAGGCCAA GAACCCGGCT GAGTGGGTGG TCGTGGCCAA GCCGCAATCG CGCGAAGCCT ACGGCTGTAT GGTTCGCAAG GACGACAAGC CGTTCAAGGC CCTGGCCGAC AAGACGATCG CCGGCATGAT GAAGGACGGC ACGATCAACG CCGAATACAA GAAGTGGTTC GAGCAGCCGG TTCCGCCCAA GGGCGTGAAT ATGGAGTTCC CGCTGTCGGA CGACATGAAG GCGCTGATCA AGAACCCGAA CGACAAGGCT CTTGACTGA
|
Protein sequence | MNLAKLATVV AAVGVAVGAF GSAAHAEELT GTLKKIKDTG TITLGVRDSS IPFSYNVGGV RTIGYSYDVA TKIAEDVKKQ LGLKDLKVNE IPVTSQNRIT LLQNGTIDLE CGSTTNNLER QKQASFTNTI FIIGTRIMVK KDSGVKDWAD LKGKNVVTTA GTTSERLLRK MNDEKQMGMN IISTKDHGQS FLTLESGRAV AFMMDDALLY GERAKAKNPA EWVVVAKPQS REAYGCMVRK DDKPFKALAD KTIAGMMKDG TINAEYKKWF EQPVPPKGVN MEFPLSDDMK ALIKNPNDKA LD
|
| |