Gene Rpic_0356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0356 
Symbol 
ID6287013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp380869 
End bp382170 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content63% 
IMG OID642623923 
ProductGlu/Leu/Phe/Val dehydrogenase 
Protein accessionYP_001897946 
Protein GI187927459 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATG TCGCATCTCC GTCGACACTC CAGCACGCCA TCCCGTCCTA TCTGCCGGCC 
GACAATCTCG GCCCGTGGGG CATCTATCTG CAGCAGGTCG ATCGGGTTAC CCCCTACCTC
GGCTCGCTTG CACGTTGGGT TGAAACGCTC AAGCGCCCGA AGCGCGCGCT GATCGTCGAC
GTGCCGATCC AGATGGACGA CGGCCGCATC GCCCACTTCG AGGGCTATCG CGTGCAGCAC
AACACGTCGC GCGGCCCGGG CAAGGGCGGC GTGCGTTTCC ACCAGGACGT GACGCTGTCG
GAAGTGATGG CGTTGTCTGC CTGGATGTCG GTGAAGAATG CGGCCGTGAA TGTGCCGTAC
GGTGGTGCCA AGGGTGGTAT CCGCGTCGAC CCGCGCAAGC TGTCTTCCGG CGAACTTGAA
CGCCTGACGC GCCGCTACAC GAGCGAGATC GGCATCATCA TCGGCCCGAA CAAGGACATT
CCGGCCCCGG ACGTGAACAC CAACGCGCAG ATCATGGCGT GGATGATGGA CACGTACTCC
ATGAACGAAG GCTCCACCGC CACTGGCGTG GTGACCGGCA AGCCGATCGC ACTGGGCGGC
AGCCTGGGCC GTCGCGAAGC CACTGGCCGC GGCGTGTTCG TGGTCGGCAG CGAAGCCGCA
CGCAACCTCG GGATCGACGT CAAGGGCGCG CGCGTGGTGG TGCAGGGTTT CGGCAACGTG
GGCAGCGTGG CAGCCAAGCT GTTCCACGAC GCTGGTGCCA AGGTCATTGC CGTGCAAGAC
CACAAGGGCA TTGTGTTCAA CGGCAACGGC CTGGATGTCG ACGCGCTCAT CAAGCACGTT
GACCACAATG GCAGCGTGGC CGGCTTTGCT GCAGAGGCCG TCTCGCAAGA CGACTTCTGG
GCGCTGGACT GCGAATTCCT GATCCCGGCC GCGCTGGAAG GCCAGATCAC TGCCAAGAAC
GCGCCTCATA TCAAGGCAAA GATTGTCGTG GAAGGTGCAA ACGGCCCGAC GACGCCCGAG
GCGGACGACA TCCTGCGCGA CCGGGGCATC CTGGTCTGCC CGGACGTGAT CGCCAACGCT
GGCGGCGTAA CGGTCAGCTA TTTCGAATGG GTGCAGGATT TCTCGAGCTT CTTCTGGACC
GAAGACGAGA TCAACCAGCG TCTGGTACGG ATCATGCAAG ACGCCTTCCG TGGCGTCTGG
CAAGTGGCGC AGGACAACAA GGTTACTCTG CGTACGGCGG CGTTCATCAT CGCCTGTACG
CGGATTCTGC AGGCCCGCCA AGAGCGCGGT CTGTACCCCT GA
 
Protein sequence
MSNVASPSTL QHAIPSYLPA DNLGPWGIYL QQVDRVTPYL GSLARWVETL KRPKRALIVD 
VPIQMDDGRI AHFEGYRVQH NTSRGPGKGG VRFHQDVTLS EVMALSAWMS VKNAAVNVPY
GGAKGGIRVD PRKLSSGELE RLTRRYTSEI GIIIGPNKDI PAPDVNTNAQ IMAWMMDTYS
MNEGSTATGV VTGKPIALGG SLGRREATGR GVFVVGSEAA RNLGIDVKGA RVVVQGFGNV
GSVAAKLFHD AGAKVIAVQD HKGIVFNGNG LDVDALIKHV DHNGSVAGFA AEAVSQDDFW
ALDCEFLIPA ALEGQITAKN APHIKAKIVV EGANGPTTPE ADDILRDRGI LVCPDVIANA
GGVTVSYFEW VQDFSSFFWT EDEINQRLVR IMQDAFRGVW QVAQDNKVTL RTAAFIIACT
RILQARQERG LYP