| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0349 |
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| Symbol | |
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| ID | 6287326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 371636 |
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| End bp | 374116 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623916 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001897939 |
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| Protein GI | 187927452 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0371901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CTGAACTCCC CACCAGCGCG CAGCCGCAGG CCGGCCAGCG TTCCAATTTC
CTCGTCCGGC GCGTTGCTGT GCTGGGCGCC GGCGTGATGG GGGCGCAGAT TGCCGCGCAC
CTGATCAACG CCAAGGTTCC TGTCACGCTG TTTGATCTTC CGGCCAAGGA AGGCCCGAAG
AGCGGCATCG CGCTGAAGGC CATTGAAAAC CTGAAGAAGC TGTCGCCGGC GCCGCTCGGT
ATCAAGGATG ACGCCAACCT GATCCAGGCG GCCAACTACG AAGACGACAT CGAAAAGCTG
CGCGATTGCG ATCTCGTGAT CGAAGCGATT GCCGAGCGCA TGGACTGGAA GCACGACCTG
TATAAGAAGG TCGCGCCGCA CATCGCCCCG CATGCGATCT TTGCCTCCAA CACGTCGGGT
CTGTCGATCA CCGAACTATC CGATGGCTTT GATGCCGAGC TGAAGTCGCG CTTCTGCGGC
GTGCACTTCT TCAATCCGCC GCGCTACATG CACCTGGTCG AGCTGATCCC GACTGCCCAC
ACGCGCGGCG ACATTCTCGA CAAGCTGGAA ACGTTCCTGA CCTCCGCGCT CGGCAAGGGC
GTGGTGCGCG CGAAGGACAC GCCCAACTTC ATCGCCAACC GCGTCGGCAT CTTCTCGATC
CTGGCCGTAT TTGCGGAGTC GGCCAAGTAC GGCATTCCGT TCGACGTGGT CGATGACCTG
ACGGGCTCGA AGCTGGGCCG TGCCAAGTCA GCGACGTTCC GCACGGCGGA CGTGGTGGGC
CTGGACACGA TGGCGCACGT CATCAAGACG ATGCAGGACA ACCTGAAGGA GGATCCGTTC
GCTCCGGTCT ACGCTACGCC GCCCGTGCTG GCCAAGCTGG TGGAGGCGGG CGCCCTGGGC
CAGAAGGCCG GCGCCGGTTT CTACAAAAAG GAAGGCAAAG AAATCAAGGT GCTGGATCCG
CAAAGCGGCC AGTACGGCCC AAGTGGCAAG AAGGCGGATG ACATCGTTGT GCGCATCCTG
AAGAAGGAGC CGGCCGAGCG TCTGAAGCTG CTGCGCGAAT CGACCAACCC GCAGGCGCAG
TTCCTGTGGG CTGTGTTCCG TGACGTGTTC CACTACATCG CCGTGTACCT GGAGCAAATT
GCCGACTCCG CCGCGGAAGT GGATCTGGCG ATCCGCTGGG GCTTCGGCTG GAACAGCGGC
CCGTTCGAAG ACTGGCAAGA GGCGGGCTGG AAGCAGGTGG CCGAGTGGGT GAAGGAAGAC
ATCGAAGCCG GCAAGGCGCT GTCGAACGCA GCGCTGCCGC AGTGGGTGTT TTCCGGCCCA
GTGGCGGACA ACGGCGGTGT GCATTCGGCA CAGGGTTCGT GGTCGGCCAA ACAGGGCACG
TTCCTGCAAC GCAGCACGCT GCCGGTGTAC GGCCGCCAGG TGTTCCGCGC ACCCATCAAG
GGTGCGACCA CGGTCAATCC GCTCACGTAT GGCAAGACCA TCGAAGAGAC CGACGCCGTG
CGCATCTGGG TGGACGATGC GGCCGGCCAG GACGACGTGC TGGTCGTCTC GTTCAAGAGC
AAGATGAATA CGATCGGGCC GAGCGTCATC GACGGTCTGA CGCGTGCCGT TGACCTGGCC
GAAGCCGGCT ATAAGGGTCT GGTGGTGTGG CAGCCGACGT CTCTCAAGCT GGGCGCGCCG
GGCGGCCCGT TCTCCGCCGG TGCAAACCTC GAAGAAGCCA TGCCCGCCTT TATGATGGGC
GGCGCCAAGG GCATCGAGCC GTTCGTCAAG AAGTTTCAGG ACGGCATGAT GCGTGTGAAG
TACGCCGGCG TGCCGGTCGT GTCGGCCGCA TCGGGCATCG CACTGGGCGG CGGCTGCGAA
CTGCTGCTGC ACTCGGCCAA GCGTGTGGCT GCGCTGGAGA CGTACATCGG TCTCGTGGAA
GTGGGCGTGG GCCTGGTGCC GGCAGGTGGC GGCCTGAAGG AAGCGGCCTT GGCCGCTGCC
AAGGCTGCGC AGGCAGCGGG CAGCACGAAC ATCCTGCAGT TCCTGACCAA CCGCTTCCAG
GCTGCGGCTA TGGCCAAGGT GTCGTCTTCC GCGCTGGACG CGCAGAAGAT CGGCTACCTG
CAACCGACCG ACACGATTGT GTTCAACGTG CACGAATTGC TGCACGTTGC GCGCAATGAA
GTGCGCGCGC TGTCCGACTC GGGCTACCGC GCGCCGCTGC GTCCGGTGGG CATTCCGGTG
GCAGGTCGTT CGGGTATCGC GACGATCAAG GCGTCGCTGG TGAACATGCG TGACGGCGGC
TTCATCTCGC AGCACGACTT CACGATTGCC TCGCGCATCG CTGAAGCCGT GTGCGGCGGT
GACGTCGAAG CCGGCGCGCT GGTGGATGAA GAATGGCTGC TGGCGCTGGA GCGCAAGGCC
TTCGTGGACC TGCTCGGCAG CGCCAAGACC CAGGAACGCA TCATGGGCAT GCTGCAGACC
GGCAAGCCGG TGCGTAACTA A
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| Protein sequence | MTRTELPTSA QPQAGQRSNF LVRRVAVLGA GVMGAQIAAH LINAKVPVTL FDLPAKEGPK
SGIALKAIEN LKKLSPAPLG IKDDANLIQA ANYEDDIEKL RDCDLVIEAI AERMDWKHDL
YKKVAPHIAP HAIFASNTSG LSITELSDGF DAELKSRFCG VHFFNPPRYM HLVELIPTAH
TRGDILDKLE TFLTSALGKG VVRAKDTPNF IANRVGIFSI LAVFAESAKY GIPFDVVDDL
TGSKLGRAKS ATFRTADVVG LDTMAHVIKT MQDNLKEDPF APVYATPPVL AKLVEAGALG
QKAGAGFYKK EGKEIKVLDP QSGQYGPSGK KADDIVVRIL KKEPAERLKL LRESTNPQAQ
FLWAVFRDVF HYIAVYLEQI ADSAAEVDLA IRWGFGWNSG PFEDWQEAGW KQVAEWVKED
IEAGKALSNA ALPQWVFSGP VADNGGVHSA QGSWSAKQGT FLQRSTLPVY GRQVFRAPIK
GATTVNPLTY GKTIEETDAV RIWVDDAAGQ DDVLVVSFKS KMNTIGPSVI DGLTRAVDLA
EAGYKGLVVW QPTSLKLGAP GGPFSAGANL EEAMPAFMMG GAKGIEPFVK KFQDGMMRVK
YAGVPVVSAA SGIALGGGCE LLLHSAKRVA ALETYIGLVE VGVGLVPAGG GLKEAALAAA
KAAQAAGSTN ILQFLTNRFQ AAAMAKVSSS ALDAQKIGYL QPTDTIVFNV HELLHVARNE
VRALSDSGYR APLRPVGIPV AGRSGIATIK ASLVNMRDGG FISQHDFTIA SRIAEAVCGG
DVEAGALVDE EWLLALERKA FVDLLGSAKT QERIMGMLQT GKPVRN
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