Gene Rpic_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0347 
Symbol 
ID6287982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp369079 
End bp369720 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content62% 
IMG OID642623914 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001897937 
Protein GI187927450 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.421077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCACC CGACCGCTCG TCTCGAATCG AATCACGCAG CAGCCACGCC GATGCGAAAG 
GGCGAGTTGA CGCGTGCAGC GATTCTCGAT GCCGCGCTGG AACTGGCCTC GCGCGACGGA
CTGGAAGGAT TGACGATCGG TGTGCTCGCG GAGCGCATGC AGATGAGCAA GAGCGGGGTG
TTCGCGCACT TCGGCTCGCG TGAGGATCTG CAGGTGGAAG TGGTTCGCGA GTATCACAAA
CGGTTCGAGC AGGAAGTTTT CTACCCGAGC TTGACGGAAC CGCGCGGTCT GCCGCGCCTG
TGGAGCATGG TGCGACGCTG GATGGAGCGC CGCATTCAGG AAGTGACCAC GGGCTGCATC
TACATCAGCG GCGCGGTGGA GTACGACGAT CGTGCCGAAA GCCCGGTGCG CGACGAACTC
GTCAAGAGCG TGACGATCTG GCGTGCAGCA TTGGCCCGCG CGATCGCACA GGCAAAGGAA
GAAGGCCACC TGCGTGCAGA AGCGGACCCG CAATTGATGC TCTTCGAGAT GTACAGCCTG
GAACTGGGTC TGCATCACGA TGCGCGTTTC CTGCGGTTGC CGAACAGCGC CGAGCTGGCC
ATGGTGGCGC TTAACAAACT CATTCAGTCT TACCGAACCT GA
 
Protein sequence
MRHPTARLES NHAAATPMRK GELTRAAILD AALELASRDG LEGLTIGVLA ERMQMSKSGV 
FAHFGSREDL QVEVVREYHK RFEQEVFYPS LTEPRGLPRL WSMVRRWMER RIQEVTTGCI
YISGAVEYDD RAESPVRDEL VKSVTIWRAA LARAIAQAKE EGHLRAEADP QLMLFEMYSL
ELGLHHDARF LRLPNSAELA MVALNKLIQS YRT