| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0336 |
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| Symbol | ubiB |
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| ID | 6287597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 356202 |
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| End bp | 357779 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623903 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_001897926 |
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| Protein GI | 187927439 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCT TCTTCCGGCT GGGCAAGATC GTTTTCGTCA TCCTCTATTA CGGGCTGGAT
CAGCTCGCGT TGTCGGGCTT CAAGAGCCGC CGCATTCGCG CGCTGGTCTG GCTGCTCACG
CTGGGCCGCA AGCCGAAACT CCCGCGTGGC GAGCGCCTGC GCCTGGCGTT GGAGCAGCTT
GGGCCCATCT TCGTGAAGTT CGGGCAGGTG CTGTCGACGC GGCGCGATCT GCTGCCGCCA
GATGTGGCCG ACGAACTGGC CAAGCTGCAG GATCGTGTGC CGCCGTTCGA CCCGAAGGTG
GCCGCCGCCA TCGTGGAGAA ATCGCTCGGC AAGCCGCTCT CGGCGCTGTT CCATCGTTTC
GATCATCACC CCGTGGCGAG CGCGTCGATT GCACAGGTGC ATTTCGCCAC GTTGCGCGGC
GGCCCCTATG ATGGTCGCGA GGTGGCGGTC AAGGTCTTGC GCCCGGGCAT GCTGCCTGTG
ATCGACAGCG ACCTCGCGCT CATGCGGGAT CTCGCTACCT GGATCGAAAA GCTGTGGGCC
GACGCCAAGC GCCTGAAGCC GCGCGAGGTG GTCGCCGAGT TCGACAAGTA CCTGCACGAC
GAGCTGGACC TGATGCGCGA GGCGGCCAAC GCCAGCCAGC TGCGCCGCAA TTTTGCCAAG
TCCGATCTGT TGCTGGTGCC CGAGGTGTTC TGGGATTGGT GCACGTCTGA AGTGTTCGTG
ATGGAGCGCA TGCACGGCAT GCGGATCTCG CACACCGAAG AGCTGCGTGC CGCCGGTGTC
GACATGCACA AGCTCGCCCG CGACGGCGTG GAGATCTTCT TCACGCAGGT CTTTCGCGAC
GGCTTTTTCC ACGCCGACAT GCACCCGGGC AACATCCTCG TGAGCGTGGC ACCCGAGACG
CTGGGCCGCT ATATCGCGCT GGATTTCGGC ATCGTCGGGG CGCTGTCGGA GTTCGACAAA
AACTACCTCG CGCAGAACTT CCTGGCGTTT TTCCAGCGCG ACTACCACCG CGTGGCGGTG
CTGCATATCG AGTCCGGCTG GGCGCCGGAA GAGACGCGCG TGGAAGAGCT GGAAGGCGCC
ATCCGCGCAT GCTGCGAACC GTATTTCGAT CGGCCGCTGG GCGAGATCTC GCTCGGCCTG
GTGCTGATGC GACTGTTCCA GACCTCGCGC CGCTTCAACG TGGAAGTGCA GCCGCAGCTC
GTGCTGCTGC AGAAGACGCT GCTCAACGTG GAAGGCCTTG GGCGCCAGCT CGATCCCGAT
CTGGACCTGT GGAAGACGGC CAAGCCCTTC CTCGAGCGCT GGATGCACGA GCAGATCGGC
TGGCGCGGTT TTGTCGAGCG CCTGAAGGTC GAGGCGCCGC AATGGGCCAA CAAGCTGCCG
GACTTCCCGC GTCTGGTGCA CCAGATTCTG GATCGCCACT CCCGCGAGGA CGGCAATGCG
CAAACTGCGG CGCTCACCGC GCTGCTTGCC GAGCAAAAGC GCACGAACCG GCTGTTGTCT
GCCGCTCTGC TGTTCGTTGG TGGCTTCGCA GTCGGCATTG TCGCGACGCA TGTGCTGGCC
TGGATGGCCC GTTACTGA
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| Protein sequence | MTRFFRLGKI VFVILYYGLD QLALSGFKSR RIRALVWLLT LGRKPKLPRG ERLRLALEQL
GPIFVKFGQV LSTRRDLLPP DVADELAKLQ DRVPPFDPKV AAAIVEKSLG KPLSALFHRF
DHHPVASASI AQVHFATLRG GPYDGREVAV KVLRPGMLPV IDSDLALMRD LATWIEKLWA
DAKRLKPREV VAEFDKYLHD ELDLMREAAN ASQLRRNFAK SDLLLVPEVF WDWCTSEVFV
MERMHGMRIS HTEELRAAGV DMHKLARDGV EIFFTQVFRD GFFHADMHPG NILVSVAPET
LGRYIALDFG IVGALSEFDK NYLAQNFLAF FQRDYHRVAV LHIESGWAPE ETRVEELEGA
IRACCEPYFD RPLGEISLGL VLMRLFQTSR RFNVEVQPQL VLLQKTLLNV EGLGRQLDPD
LDLWKTAKPF LERWMHEQIG WRGFVERLKV EAPQWANKLP DFPRLVHQIL DRHSREDGNA
QTAALTALLA EQKRTNRLLS AALLFVGGFA VGIVATHVLA WMARY
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