Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0335 |
Symbol | |
ID | 6289239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 355543 |
End bp | 356205 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642623902 |
Product | Sterol-binding domain protein |
Protein accession | YP_001897925 |
Protein GI | 187927438 |
COG category | [S] Function unknown |
COG ID | [COG3165] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCGA CAGCCACTTC GTCTCCGTCT TCGTTTCCGC TCGTGCTGAT GCAGCCGCTG CTGCTCGCGC TCAACCATCT GCTGCGCCAG GAGCCCTGGG CGCAGGAGAC GTTGCGGCCC TTCGCAGGCC GCGTGGCGCG CTTTGACCTG GCGCCCATGT CGATGACGTT GCAGGTGGAC GCCGCCGGCC TGGTGACCGC TCCCGCGCCT GATGTTGAAC CGGCTGTGAC CGTTGTCGTG CCGCTCGCGG CCGCTGCCGG CGATTACGCC ACGGGCGGGC AGGCCGCCGT GCTCAAGCAC GTGCGCATCG AGGGCGAGGC CGAATTTGCC AACGTACTGT CGACACTGCT GCGCAACCTG CGCTGGGATG CGGCCGAAGA CCTCTCGCGT GTGTTTGGCG ACGTGATCGC GCAGCGCATG GTGAGCGGCG CCCAGGCCGC CCGCACCGAA GCCACGCGCG TCAGCCGTTC GCTGGCGGAA TCGGTGGCGT CGTACCTGAC CGATGAGCAA CCGACGCTGG TGCGCCATGC GCGCCTTGCG CAGTTCGCCG CCGATGTGGC CGCACTGCGT GACGCCGAAG CGCGTCTGGT CAAACGGCTG GAGCGGCTCG AAAAGCTCCC GCGACCGGCC ACCCGGACCG CACGTCAGGG TGAATCGGCA TGA
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Protein sequence | MSSTATSSPS SFPLVLMQPL LLALNHLLRQ EPWAQETLRP FAGRVARFDL APMSMTLQVD AAGLVTAPAP DVEPAVTVVV PLAAAAGDYA TGGQAAVLKH VRIEGEAEFA NVLSTLLRNL RWDAAEDLSR VFGDVIAQRM VSGAQAARTE ATRVSRSLAE SVASYLTDEQ PTLVRHARLA QFAADVAALR DAEARLVKRL ERLEKLPRPA TRTARQGESA
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