Gene Rpic_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0335 
Symbol 
ID6289239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp355543 
End bp356205 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID642623902 
ProductSterol-binding domain protein 
Protein accessionYP_001897925 
Protein GI187927438 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGA CAGCCACTTC GTCTCCGTCT TCGTTTCCGC TCGTGCTGAT GCAGCCGCTG 
CTGCTCGCGC TCAACCATCT GCTGCGCCAG GAGCCCTGGG CGCAGGAGAC GTTGCGGCCC
TTCGCAGGCC GCGTGGCGCG CTTTGACCTG GCGCCCATGT CGATGACGTT GCAGGTGGAC
GCCGCCGGCC TGGTGACCGC TCCCGCGCCT GATGTTGAAC CGGCTGTGAC CGTTGTCGTG
CCGCTCGCGG CCGCTGCCGG CGATTACGCC ACGGGCGGGC AGGCCGCCGT GCTCAAGCAC
GTGCGCATCG AGGGCGAGGC CGAATTTGCC AACGTACTGT CGACACTGCT GCGCAACCTG
CGCTGGGATG CGGCCGAAGA CCTCTCGCGT GTGTTTGGCG ACGTGATCGC GCAGCGCATG
GTGAGCGGCG CCCAGGCCGC CCGCACCGAA GCCACGCGCG TCAGCCGTTC GCTGGCGGAA
TCGGTGGCGT CGTACCTGAC CGATGAGCAA CCGACGCTGG TGCGCCATGC GCGCCTTGCG
CAGTTCGCCG CCGATGTGGC CGCACTGCGT GACGCCGAAG CGCGTCTGGT CAAACGGCTG
GAGCGGCTCG AAAAGCTCCC GCGACCGGCC ACCCGGACCG CACGTCAGGG TGAATCGGCA
TGA
 
Protein sequence
MSSTATSSPS SFPLVLMQPL LLALNHLLRQ EPWAQETLRP FAGRVARFDL APMSMTLQVD 
AAGLVTAPAP DVEPAVTVVV PLAAAAGDYA TGGQAAVLKH VRIEGEAEFA NVLSTLLRNL
RWDAAEDLSR VFGDVIAQRM VSGAQAARTE ATRVSRSLAE SVASYLTDEQ PTLVRHARLA
QFAADVAALR DAEARLVKRL ERLEKLPRPA TRTARQGESA