Gene Rpic_0330 details

Gene Information

• Locus tag: Rpic_0330
• ID: 6289521
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12J
• Kingdom: Bacteria
• Replicon accession: NC_010682
• Strand: +
• Start bp: 350593
• End bp: 351030
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642623897
• Product: histidine triad (HIT) protein
• Protein accession: YP_001897920
• Protein GI: 187927433
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0832
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCGAAC GGGCGCCCGG CTGCGCGCTA TGCGAGGCGG ACGGCGGCGA GCCCGTCTGG 
CGTAACGCCA AAGCGCGCGT GGTGCTGGTC GAGCACGCGC GCTTTCCGGG TTTCTGCCGT 
GTCATCTGGA ACGACCACGT GGCCGAACAG ACCGATTTGT CCGATAACGA TCGCCATTGG 
CTGATGGAAC TCGTCTCCCG CGTTGAGCGT GTGCTGCGCG CCGAACTGGC CCCGGACAAG 
ATCAACCTGG CCAGCTTCGG CAATTTCGTG CCGCATCTGC ACTGGCACGT CATCCCGCGC 
TATCGGTGGG ACACGCATTT TCCAGAAGCC GTGTGGGGGC CCGAGCAGCG CGCGCCCGAT 
AACGAGCGCA TGGCCGAGAT CACGGCCAAG CTGCCGGCGC TGTCGTACGC ACTCCAAGCG 
GCGCTAGCCG ACGCGTGA 

 

Protein sequence

MTERAPGCAL CEADGGEPVW RNAKARVVLV EHARFPGFCR VIWNDHVAEQ TDLSDNDRHW 
LMELVSRVER VLRAELAPDK INLASFGNFV PHLHWHVIPR YRWDTHFPEA VWGPEQRAPD 
NERMAEITAK LPALSYALQA ALADA